WormBase Tree Display for Gene: WBGene00007786
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WBGene00007786 | SMap | S_parent | Sequence | C27H6 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | rmd-2 | Person_evidence | WBPerson2692 | |||
WBPerson552 | |||||||
Sequence_name | C27H6.4 | ||||||
Molecular_name | C27H6.4a | ||||||
C27H6.4a.1 | |||||||
CE08428 | |||||||
C27H6.4b | |||||||
CE45113 | |||||||
C27H6.4c | |||||||
CE42479 | |||||||
C27H6.4b.1 | |||||||
C27H6.4c.1 | |||||||
Other_name | CELE_C27H6.4 | Accession_evidence | NDB | BX284605 | |||
Public_name | rmd-2 | ||||||
DB_info | Database | AceView | gene | 5K464 | |||
WormQTL | gene | WBGene00007786 | |||||
WormFlux | gene | WBGene00007786 | |||||
NDB | locus_tag | CELE_C27H6.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00007786|UniProtKB=Q8MQB5 | |||||
family | PTHR16056 | ||||||
NCBI | gene | 179391 | |||||
RefSeq | protein | NM_171523.6 | |||||
NM_001129394.5 | |||||||
NM_171522.7 | |||||||
TREEFAM | TREEFAM_ID | TF315854 | |||||
TrEMBL | UniProtAcc | Q8MQB5 | |||||
B2D6P1 | |||||||
P90762 | |||||||
UniProt_GCRP | UniProtAcc | Q8MQB5 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rmd | ||||||
Allele (34) | |||||||
Possibly_affected_by | WBVar02154061 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00005821 | ||||||
00005822 | |||||||
00005823 | |||||||
00005824 | |||||||
00005825 | |||||||
00005826 | |||||||
00084529 | |||||||
Ortholog (39) | |||||||
Paralog | WBGene00007190 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00012976 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00012977 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00009369 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00011501 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00015855 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00018125 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00020711 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00020070 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable microtubule binding activity. Predicted to be located in mitochondrion; mitotic spindle pole; and spindle microtubule. Is an ortholog of human RMDN2 (regulator of microtubule dynamics 2). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS (3) | ||||||
Corresponding_CDS_history | C27H6.4:wp82 | ||||||
C27H6.4b:wp215 | |||||||
Corresponding_transcript | C27H6.4a.1 | ||||||
C27H6.4b.1 | |||||||
C27H6.4c.1 | |||||||
Other_sequence (70) | |||||||
Associated_feature | WBsf652954 | ||||||
WBsf652955 | |||||||
WBsf1001030 | |||||||
WBsf1001031 | |||||||
WBsf1020252 | |||||||
Experimental_info | RNAi_result | WBRNAi00041383 | Inferred_automatically | RNAi_primary | |||
WBRNAi00081133 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011282 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1022284 | ||||||
Expr1033379 | |||||||
Expr1145417 | |||||||
Expr2015371 | |||||||
Expr2033605 | |||||||
Drives_construct | WBCnstr00033483 | ||||||
Construct_product | WBCnstr00033483 | ||||||
Microarray_results (32) | |||||||
Expression_cluster (121) | |||||||
Interaction | WBInteraction000250493 | ||||||
WBInteraction000551421 | |||||||
WBInteraction000571076 | |||||||
WBInteraction000571116 | |||||||
WBInteraction000576556 | |||||||
WBInteraction000577838 | |||||||
WBInteraction000580558 | |||||||
Map_info | Map | V | Position | 2.22625 | Error | 0.000679 | |
Positive | Positive_clone | C27H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00034662 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00056909 | |||||||
WBPaper00061639 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |