WormBase Tree Display for Gene: WBGene00007499
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| WBGene00007499 | SMap | S_parent | Sequence | C09H10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C09H10.5 | |||||||
| Molecular_name | C09H10.5a | ||||||||
| C09H10.5a.1 | |||||||||
| CE43405 | |||||||||
| C09H10.5b | |||||||||
| CE28534 | |||||||||
| C09H10.5c | |||||||||
| CE45499 | |||||||||
| C09H10.5b.1 | |||||||||
| C09H10.5c.1 | |||||||||
| Other_name | CELE_C09H10.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C09H10.5 | ||||||||
| DB_info | Database | AceView | gene | 2L392 | |||||
| WormQTL | gene | WBGene00007499 | |||||||
| WormFlux | gene | WBGene00007499 | |||||||
| NDB | locus_tag | CELE_C09H10.5 | |||||||
| NCBI | gene | 182478 | |||||||
| RefSeq | protein | NM_001267348.3 | |||||||
| NM_001381587.1 | |||||||||
| NM_001393186.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF322716 | |||||||
| TrEMBL | UniProtAcc | E3W729 | |||||||
| Q17882 | |||||||||
| E3W728 | |||||||||
| UniProt_GCRP | UniProtAcc | E3W729 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (53) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Paralog | WBGene00020789 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015621 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpapaaa; ABplaaaaaa; ABplpaaapa; AVK; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; glp-1; and hsf-1 based on microarray; RNA-seq; and tiling array studies. Is affected by five chemicals including rotenone; Zidovudine; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C09H10.5a | |||||||
| C09H10.5b | |||||||||
| C09H10.5c | |||||||||
| Corresponding_CDS_history | C09H10.5:wp57 | ||||||||
| C09H10.5:wp198 | |||||||||
| Corresponding_transcript | C09H10.5a.1 | ||||||||
| C09H10.5b.1 | |||||||||
| C09H10.5c.1 | |||||||||
| Other_sequence | CBC07233_1 | ||||||||
| CR01139 | |||||||||
| CRC05451_1 | |||||||||
| Associated_feature | WBsf989626 | ||||||||
| WBsf1013163 | |||||||||
| WBsf223891 | |||||||||
| WBsf223892 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00028752 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010560 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040256 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019187 | ||||||||
| Expr1033224 | |||||||||
| Expr1144326 | |||||||||
| Expr2000673 | |||||||||
| Expr2018895 | |||||||||
| Drives_construct | WBCnstr00033692 | ||||||||
| Construct_product | WBCnstr00033692 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Positive | Positive_clone | C09H10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 3.24701 | |||||||
| Method | Gene |
