WormBase Tree Display for Gene: WBGene00020789
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| WBGene00020789 | SMap | S_parent | Sequence | T25B6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T25B6.3 | |||||||
| Molecular_name | T25B6.3 | ||||||||
| T25B6.3.1 | |||||||||
| CE05013 | |||||||||
| Other_name | CELE_T25B6.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | T25B6.3 | ||||||||
| DB_info | Database | AceView | gene | XJ645 | |||||
| WormQTL | gene | WBGene00020789 | |||||||
| WormFlux | gene | WBGene00020789 | |||||||
| NDB | locus_tag | CELE_T25B6.3 | |||||||
| NCBI | gene | 188875 | |||||||
| RefSeq | protein | NM_077125.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322716 | |||||||
| TrEMBL | UniProtAcc | Q22762 | |||||||
| UniProt_GCRP | UniProtAcc | Q22762 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (12) | |||||||||
| Paralog | WBGene00007499 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015621 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in ASIL; ASIR; HSN; coelomocyte; and neurons based on single-cell RNA-seq and RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on tiling array; RNA-seq; and microarray studies. Is affected by seven chemicals including multi-walled carbon nanotube; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T25B6.3 | |||||||
| Corresponding_transcript | T25B6.3.1 | ||||||||
| Associated_feature | WBsf663074 | ||||||||
| WBsf236113 | |||||||||
| WBsf236114 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019188 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054098 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035946 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017746 | ||||||||
| Expr1157642 | |||||||||
| Expr2006481 | |||||||||
| Expr2024700 | |||||||||
| Drives_construct | WBCnstr00024886 | ||||||||
| Construct_product | WBCnstr00024886 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (37) | |||||||||
| Interaction | WBInteraction000198111 | ||||||||
| WBInteraction000245413 | |||||||||
| WBInteraction000266942 | |||||||||
| WBInteraction000293947 | |||||||||
| WBInteraction000376502 | |||||||||
| Map_info | Positive | Positive_clone | T25B6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 0.558976 | |||||||
| Method | Gene |
