WormBase Tree Display for Gene: WBGene00007488
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WBGene00007488 | SMap | S_parent | Sequence | C09G5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | dph-2 | Person_evidence | WBPerson1847 | |||
Sequence_name | C09G5.2 | ||||||
Molecular_name | C09G5.2a | ||||||
C09G5.2a.1 | |||||||
CE15608 | |||||||
C09G5.2b | |||||||
CE45960 | |||||||
C09G5.2b.1 | |||||||
Other_name | CELE_C09G5.2 | Accession_evidence | NDB | BX284602 | |||
Public_name | dph-2 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | dph | ||||||
Allele (181) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (14) | |||||||
Ortholog (57) | |||||||
Paralog | WBGene00007576 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
Structured_description | Concise_description | dph-2 encodes an ortholog of S. cerevisiae DPH2/YKL191W and human DPH2L2 (OMIM:603456); DPH-2 is a putative protein component of diphtamide synthesis. | Paper_evidence | WBPaper00005654 | |||
WBPaper00012895 | |||||||
WBPaper00013419 | |||||||
WBPaper00013534 | |||||||
WBPaper00013537 | |||||||
WBPaper00013539 | |||||||
WBPaper00013556 | |||||||
WBPaper00013562 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson567 | |||||||
Date_last_updated | 14 Dec 2009 00:00:00 | ||||||
Automated_description | Predicted to enable 4 iron, 4 sulfur cluster binding activity. Predicted to contribute to 2-(3-amino-3-carboxypropyl)histidine synthase activity. Predicted to be involved in protein histidyl modification to diphthamide. Predicted to be located in protein-containing complex. Is an ortholog of human DPH2 (diphthamide biosynthesis 2). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0070478 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3004) | ||
Molecular_info | Corresponding_CDS (2) | ||||||
Corresponding_transcript | C09G5.2a.1 | ||||||
C09G5.2b.1 | |||||||
Other_sequence | Acan_isotig11903 | ||||||
JI174376.1 | |||||||
CBC11879_1 | |||||||
Oden_isotig23517 | |||||||
Tcir_isotig13161 | |||||||
FK807855.1 | |||||||
Oden_isotig24927 | |||||||
Associated_feature | WBsf989448 | ||||||
WBsf989449 | |||||||
WBsf1013074 | |||||||
WBsf223828 | |||||||
Experimental_info | RNAi_result | WBRNAi00028737 | Inferred_automatically | RNAi_primary | |||
WBRNAi00040232 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00075412 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00072831 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00072830 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1012769 | ||||||
Expr1033219 | |||||||
Expr1144306 | |||||||
Expr2011048 | |||||||
Expr2029285 | |||||||
Drives_construct | WBCnstr00033701 | ||||||
Construct_product | WBCnstr00033701 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (96) | |||||||
Interaction (31) | |||||||
Map_info | Map | II | Position | 3.12407 | Error | 3.7e-05 | |
Positive | Positive_clone | C09G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
WBPaper00062217 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |