WormBase Tree Display for Gene: WBGene00007463

WBGene00007463 SMap: S_parent: Sequence: C08H9
  Identity: Version: 2
    Name: CGC_name: vgln-1 Person_evidence: WBPerson15034
            WBPerson237
      Sequence_name: C08H9.2
      Molecular_name: C08H9.2
        C08H9.2.1
        CE23530
      Other_name: CELE_C08H9.2 Accession_evidence: NDB BX284602
      Public_name: vgln-1
    DB_info: Database: AceView gene 2K178
        WormQTL gene WBGene00007463
        WormFlux gene WBGene00007463
        NDB locus_tag CELE_C08H9.2
        Panther gene CAEEL|WormBase=WBGene00007463|UniProtKB=Q17832
          family PTHR10627
        NCBI gene 174543
        RefSeq protein NM_063735.9
        TrEMBL UniProtAcc Q17832
        UniProt_GCRP UniProtAcc Q17832
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 14 Apr 2015 09:52:28 WBPerson2970 Name_change: CGC_name: vgln-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vgln
    Allele (73)
    Strain: WBStrain00031797
    RNASeq_FPKM (74)
    GO_annotation: 00059346
      00059347
      00059348
      00059349
      00059350
      00059351
      00115571
      00115572
    Contained_in_operon: CEOP2464
    Ortholog (46)
    Paralog: WBGene00000246 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00001597 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to enable mRNA binding activity. Predicted to be located in cytoplasm and nucleus. Predicted to be part of polysome. Is an ortholog of human HDLBP (high density lipoprotein binding protein). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C08H9.2
    Corresponding_CDS_history: C08H9.2b:wp274
    Corresponding_transcript: C08H9.2.1
    Other_sequence (171)
    Associated_feature (12)
  Experimental_info: RNAi_result: WBRNAi00040147 Inferred_automatically: RNAi_primary
      WBRNAi00033455 Inferred_automatically: RNAi_primary
      WBRNAi00072922 Inferred_automatically: RNAi_primary
      WBRNAi00113347 Inferred_automatically: RNAi_primary
      WBRNAi00072921 Inferred_automatically: RNAi_primary
      WBRNAi00024510 Inferred_automatically: RNAi_primary
      WBRNAi00112497 Inferred_automatically: RNAi_primary
      WBRNAi00008375 Inferred_automatically: RNAi_primary
      WBRNAi00072923 Inferred_automatically: RNAi_primary
      WBRNAi00113346 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019155
      Expr1033210
      Expr1144225
      Expr2017973
      Expr2036109
    Drives_construct: WBCnstr00033718
    Construct_product: WBCnstr00033718
    Regulate_expr_cluster: WBPaper00051311:VGLN-1-interacting
    Microarray_results (29)
    Expression_cluster (151)
    Interaction (136)
  Map_info: Map: II Position: 1.76405
    Positive: Positive_clone: C08H9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00029208
    WBPaper00029257
    WBPaper00032322
    WBPaper00038491
    WBPaper00041022
    WBPaper00051311
    WBPaper00055090
    WBPaper00056909
    WBPaper00058216
    WBPaper00064841
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene