WormBase Tree Display for Gene: WBGene00007242
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| WBGene00007242 | SMap | S_parent | Sequence | C01G12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | madf-5 | Person_evidence | WBPerson260 | |||||
| WBPerson1997 | |||||||||
| Sequence_name | C01G12.1 | ||||||||
| Molecular_name | C01G12.1 | ||||||||
| C01G12.1.1 | |||||||||
| CE15571 | |||||||||
| Other_name | CELE_C01G12.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | madf-5 | ||||||||
| DB_info | Database | AceView | gene | 2O861 | |||||
| WormQTL | gene | WBGene00007242 | |||||||
| WormFlux | gene | WBGene00007242 | |||||||
| NDB | locus_tag | CELE_C01G12.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007242|UniProtKB=O45233 | |||||||
| family | PTHR12243 | ||||||||
| NCBI | gene | 175118 | |||||||
| RefSeq | protein | NM_064627.6 | |||||||
| TREEFAM | TREEFAM_ID | TF318397 | |||||||
| TrEMBL | UniProtAcc | O45233 | |||||||
| UniProt_GCRP | UniProtAcc | O45233 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 17 May 2011 14:01:04 | WBPerson2970 | Name_change | CGC_name | madf-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | madf | ||||||||
| Allele (82) | |||||||||
| Strain | WBStrain00037740 | ||||||||
| WBStrain00051945 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034061 | ||||||||
| 00034062 | |||||||||
| 00034063 | |||||||||
| 00034064 | |||||||||
| 00034065 | |||||||||
| 00034066 | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00019218 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00013717 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00008118 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022608 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011575 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00009461 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of transcription regulator complex. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C01G12.1 | |||||||
| Corresponding_transcript | C01G12.1.1 | ||||||||
| Other_sequence | HBC18233_1 | ||||||||
| ES410528.1 | |||||||||
| MHC06197_1 | |||||||||
| MH09280 | |||||||||
| CRC10021_1 | |||||||||
| CSC02021_1 | |||||||||
| Dviv_isotig24627 | |||||||||
| CJC05802_1 | |||||||||
| FD515170.1 | |||||||||
| JI170358.1 | |||||||||
| Associated_feature (18) | |||||||||
| Transcription_factor | WBTranscriptionFactor000802 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00009938 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039335 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011766 | ||||||||
| Expr1033125 | |||||||||
| Expr1143448 | |||||||||
| Expr2013342 | |||||||||
| Expr2031574 | |||||||||
| Drives_construct | WBCnstr00016609 | ||||||||
| WBCnstr00033892 | |||||||||
| Construct_product | WBCnstr00016823 | ||||||||
| WBCnstr00016833 | |||||||||
| WBCnstr00017313 | |||||||||
| WBCnstr00033892 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (139) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Map | II | Position | 23.1261 | Error | 0.000585 | |||
| Positive | Positive_clone | C01G12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00053423 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
