WormBase Tree Display for Gene: WBGene00007064
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| WBGene00007064 | SMap | S_parent | Sequence | 2RSSE | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | rga-9 | Person_evidence | WBPerson342 | |||||
| Sequence_name | 2RSSE.1 | ||||||||
| Molecular_name | 2RSSE.1a | ||||||||
| 2RSSE.1a.1 | |||||||||
| CE32785 | |||||||||
| 2RSSE.1b | |||||||||
| CE48524 | |||||||||
| 2RSSE.1c | |||||||||
| CE52653 | |||||||||
| 2RSSE.1b.1 | |||||||||
| 2RSSE.1c.1 | |||||||||
| Other_name | CELE_2RSSE.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | rga-9 | ||||||||
| DB_info | Database | AceView | gene | 2P555 | |||||
| WormQTL | gene | WBGene00007064 | |||||||
| WormFlux | gene | WBGene00007064 | |||||||
| NDB | locus_tag | CELE_2RSSE.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007064|UniProtKB=U4PAK0 | |||||||
| family | PTHR23179 | ||||||||
| NCBI | gene | 353411 | |||||||
| RefSeq | protein | NM_001364067.3 | |||||||
| NM_001306602.4 | |||||||||
| NM_001393242.1 | |||||||||
| TrEMBL | UniProtAcc | A0A2X0T1Z3 | |||||||
| A4F337 | |||||||||
| U4PAK0 | |||||||||
| UniProt_GCRP | UniProtAcc | U4PAK0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 12 Sep 2013 16:27:10 | WBPerson1983 | Event | Acquires_merge | WBGene00044165 | ||||
| 3 | 07 Jun 2018 14:30:09 | WBPerson1983 | Name_change | CGC_name | rga-9 | ||||
| Acquires_merge | WBGene00044165 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rga | ||||||||
| Allele (167) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003217 | ||||||||
| 00115285 | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00013135 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | 2RSSE.1 encodes a protein that contains a RhoGAP domain and that is similar to Drosophila RhoGAP71E whose activity regulates the number and guidance of mushroom body axons. | Paper_evidence | WBPaper00030759 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 21 Jun 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable GTPase activator activity. Predicted to be involved in signal transduction. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | 2RSSE.1a | |||||||
| 2RSSE.1b | |||||||||
| 2RSSE.1c | |||||||||
| Corresponding_transcript | 2RSSE.1a.1 | ||||||||
| 2RSSE.1b.1 | |||||||||
| 2RSSE.1c.1 | |||||||||
| Other_sequence (30) | |||||||||
| Associated_feature (25) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00107877 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1024199 | ||||||||
| Expr1026368 | |||||||||
| Expr1033036 | |||||||||
| Expr1040192 | |||||||||
| Expr1142793 | |||||||||
| Expr1142794 | |||||||||
| Expr2000001 | |||||||||
| Expr2018216 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (102) | |||||||||
| Map_info | Map | II | Position | 24.7724 | |||||
| Positive | Positive_clone | 2RSSE | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057546 | |||||||||
| WBPaper00064898 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
