WormBase Tree Display for Gene: WBGene00007017
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| WBGene00007017 | Evidence | Author_evidence | Bourbon H-M | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y113G7B | ||||||
| Identity | Version | 3 | |||||||
| Name | CGC_name | mdt-17 | |||||||
| Sequence_name | Y113G7B.18 | ||||||||
| Molecular_name | Y113G7B.18a | ||||||||
| Y113G7B.18a.1 | |||||||||
| CE46431 | |||||||||
| Y113G7B.18b | |||||||||
| CE46521 | |||||||||
| Y113G7B.18a.2 | |||||||||
| Y113G7B.18b.1 | |||||||||
| Y113G7B.18b.2 | |||||||||
| Other_name | CELE_Y113G7B.18 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | mdt-17 | ||||||||
| DB_info | Database | AceView | gene | 5U722 | |||||
| WormQTL | gene | WBGene00007017 | |||||||
| WormFlux | gene | WBGene00007017 | |||||||
| NDB | locus_tag | CELE_Y113G7B.18 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007017|UniProtKB=Q9NAL4 | |||||||
| family | PTHR13114 | ||||||||
| NCBI | gene | 180325 | |||||||
| RefSeq | protein | NM_001269981.5 | |||||||
| NM_001392708.1 | |||||||||
| SwissProt | UniProtAcc | Q9NAL4 | |||||||
| UniProt_GCRP | UniProtAcc | Q9NAL4 | |||||||
| OMIM | gene | 603810 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 14 May 2004 11:48:16 | WBPerson1845 | Event | Created | |||
| 2 | 22 Mar 2006 16:19:52 | WBPerson4025 | Event | Acquires_merge | WBGene00013767 | ||||
| 3 | 07 Sep 2006 16:55:18 | WBPerson2970 | Event | Acquires_merge | WBGene00013769 | ||||
| Acquires_merge | WBGene00013767 | ||||||||
| WBGene00013769 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mdt | ||||||||
| Allele (320) | |||||||||
| Strain | WBStrain00051417 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00096146 | ||||||||
| 00096147 | |||||||||
| 00096148 | |||||||||
| 00096149 | |||||||||
| 00096150 | |||||||||
| 00096151 | |||||||||
| 00115213 | |||||||||
| 00115214 | |||||||||
| 00115215 | |||||||||
| Contained_in_operon | CEOP5508 | ||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of core mediator complex and mediator complex. Human ortholog(s) of this gene implicated in infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly. Is an ortholog of human MED17 (mediator complex subunit 17). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111262 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2375) | ||||
| Molecular_info | Corresponding_CDS | Y113G7B.18a | |||||||
| Y113G7B.18b | |||||||||
| Corresponding_CDS_history | Y113G7B.18:wp156 | ||||||||
| Y113G7B.18:wp164 | |||||||||
| Y113G7B.18:wp227 | |||||||||
| Corresponding_transcript | Y113G7B.18a.1 | ||||||||
| Y113G7B.18a.2 | |||||||||
| Y113G7B.18b.1 | |||||||||
| Y113G7B.18b.2 | |||||||||
| Other_sequence (30) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Expr1025673 | ||||||||
| Expr1033007 | |||||||||
| Expr1158914 | |||||||||
| Expr2013472 | |||||||||
| Expr2031706 | |||||||||
| Microarray_results (35) | |||||||||
| Expression_cluster (110) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | V | Position | 24.979 | Error | 0.000589 | |||
| Positive | Positive_clone | Y113G7B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006530 | ||||||||
| WBPaper00029038 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059726 | |||||||||
| WBPaper00062625 | |||||||||
| WBPaper00065308 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [140610 pad] Gene history inconsistency in this object, some of the history has been altered. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
