WormBase Tree Display for Gene: WBGene00006986
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WBGene00006986 | SMap | S_parent | Sequence | Y75B8A | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | zip | |||||
Allele (377) | ||||||
Possibly_affected_by | WBVar02157852 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00015394 | |||||
Ortholog (20) | ||||||
Paralog | WBGene00013562 | Caenorhabditis elegans | From_analysis | TreeFam | ||
WBGene00018761 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Structured_description | Concise_description | zip-1 encodes a protein with weak similarity to basic-leucine zipper-type transcription factors; ZIP-1 was identified in a screen for proteins able to bind a pharyngeal muscle-specific enhancer in the promoter of myo-2, which encodes a pharyngeal muscle-specific myosin; as loss of ZIP-1 activity via RNA-mediated interference (RNAi) does not result in any abnormalities, ZIP-1 may function redundantly in pharyngeal muscle specification. | Paper_evidence | WBPaper00005395 | ||
Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 26 Jan 2006 00:00:00 | |||||
Automated_description | Predicted to enable DNA binding activity. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y75B8A.35a | ||||
Y75B8A.35b | ||||||
Y75B8A.35c | ||||||
Corresponding_transcript | Y75B8A.35a.1 | |||||
Y75B8A.35a.2 | ||||||
Y75B8A.35b.1 | ||||||
Y75B8A.35b.2 | ||||||
Y75B8A.35b.3 | ||||||
Y75B8A.35c.1 | ||||||
Other_sequence | AF160492 | |||||
FG581815.1 | ||||||
SR01239 | ||||||
Associated_feature | WBsf645658 | |||||
WBsf994617 | ||||||
WBsf994618 | ||||||
WBsf994619 | ||||||
WBsf1016177 | ||||||
WBsf1016178 | ||||||
WBsf1016179 | ||||||
WBsf225898 | ||||||
WBsf225899 | ||||||
Transcription_factor | WBTranscriptionFactor000222 | |||||
Experimental_info | RNAi_result | WBRNAi00058469 | Inferred_automatically | RNAi_primary | ||
WBRNAi00117229 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00037851 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00006899 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00058463 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00058468 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr16097 | |||||
Expr1023548 | ||||||
Expr1032987 | ||||||
Expr1161882 | ||||||
Expr2018155 | ||||||
Expr2036292 | ||||||
Microarray_results (29) | ||||||
Expression_cluster (127) | ||||||
Interaction (11) | ||||||
Map_info (4) | ||||||
Reference | WBPaper00005395 | |||||
WBPaper00023210 | ||||||
WBPaper00027309 | ||||||
WBPaper00057437 | ||||||
WBPaper00060662 | ||||||
WBPaper00062345 | ||||||
WBPaper00062737 | ||||||
WBPaper00062920 | ||||||
WBPaper00064440 | ||||||
WBPaper00064532 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |