WormBase Tree Display for Gene: WBGene00006933
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| WBGene00006933 | Evidence | Person_evidence | WBPerson342 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F59G1 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | vps-35 | |||||||
| Sequence_name | F59G1.3 | ||||||||
| Molecular_name | F59G1.3 | ||||||||
| F59G1.3.1 | |||||||||
| CE39945 | |||||||||
| Other_name | CELE_F59G1.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | vps-35 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | vps | ||||||||
| Allele (55) | |||||||||
| Strain | WBStrain00023608 | ||||||||
| WBStrain00036561 | |||||||||
| WBStrain00004791 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Contained_in_operon | CEOP2232 | ||||||||
| Ortholog (41) | |||||||||
| Structured_description | Automated_description | Involved in positive regulation of protein localization to cell periphery; protein localization to postsynaptic membrane; and regulation of presynapse assembly. Located in cytosol; dendrite; and neuronal cell body. Expressed in several structures, including body wall musculature; ciliated neurons; coelomocyte; intestine; and pharynx. Human ortholog(s) of this gene implicated in Parkinson's disease 17. Is an ortholog of human VPS35 (VPS35 retromer complex component). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:14330 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13487) | ||||
| DOID:0060897 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:13487) | ||||||
| Molecular_info | Corresponding_CDS | F59G1.3 | |||||||
| Corresponding_CDS_history | F59G1.3:wp155 | ||||||||
| F59G1.3b:wp271 | |||||||||
| Corresponding_transcript | F59G1.3.1 | ||||||||
| Other_sequence (21) | |||||||||
| Associated_feature | WBsf644242 | ||||||||
| WBsf221359 | |||||||||
| WBsf221360 | |||||||||
| Experimental_info | RNAi_result (23) | ||||||||
| Expr_pattern | Expr3873 | ||||||||
| Expr3874 | |||||||||
| Expr8289 | |||||||||
| Expr1011537 | |||||||||
| Expr1032948 | |||||||||
| Expr1152975 | |||||||||
| Expr2018026 | |||||||||
| Expr2036163 | |||||||||
| Drives_construct | WBCnstr00011706 | ||||||||
| WBCnstr00013237 | |||||||||
| Construct_product | WBCnstr00009188 | ||||||||
| WBCnstr00011707 | |||||||||
| WBCnstr00013237 | |||||||||
| WBCnstr00018950 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction (110) | |||||||||
| WBProcess | WBbiopr:00000073 | ||||||||
| Map_info | Map | II | Position | -0.853861 | Error | 0.000279 | |||
| Positive | Positive_clone | F59G1 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (29) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
