WormBase Tree Display for Gene: WBGene00006719
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WBGene00006719 | SMap | S_parent | Sequence | F49E12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | ubc-24 | Person_evidence | WBPerson89 | |||||
Sequence_name | F49E12.4 | ||||||||
Molecular_name | F49E12.4 | ||||||||
F49E12.4.1 | |||||||||
CE34872 | |||||||||
Other_name | CELE_F49E12.4 | Accession_evidence | NDB | BX284602 | |||||
Public_name | ubc-24 | ||||||||
DB_info | Database | AceView | gene | 2I697 | |||||
WormQTL | gene | WBGene00006719 | |||||||
WormFlux | gene | WBGene00006719 | |||||||
NDB | locus_tag | CELE_F49E12.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006719|UniProtKB=Q20617 | |||||||
family | PTHR24068 | ||||||||
NCBI | gene | 186057 | |||||||
RefSeq | protein | NM_063368.5 | |||||||
TREEFAM | TREEFAM_ID | TF313043 | |||||||
TrEMBL | UniProtAcc | Q20617 | |||||||
UniProt_GCRP | UniProtAcc | Q20617 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ubc | ||||||||
Allele (17) | |||||||||
Strain | WBStrain00033166 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00068541 | ||||||||
00068542 | |||||||||
00068543 | |||||||||
Ortholog (23) | |||||||||
Paralog | WBGene00002344 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00006708 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00006713 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00006717 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00006720 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | ubc-24 encodes a predicted conjugating enzyme (UBCs/E2s) of the ubiquitin-conjugation system. | Paper_evidence | WBPaper00005337 | |||||
Curator_confirmed | WBPerson48 | ||||||||
Date_last_updated | 30 Jul 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable NEDD8 transferase activity. Predicted to be involved in protein neddylation. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F49E12.4 | |||||||
Corresponding_CDS_history | F49E12.4:wp106 | ||||||||
Corresponding_transcript | F49E12.4.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00076451 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032539 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00094712 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015319 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00023478 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00023750 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00023238 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00082818 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00047852 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024036 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014049 | ||||||||
Expr1151686 | |||||||||
Expr2017710 | |||||||||
Expr2035848 | |||||||||
Drives_construct | WBCnstr00034195 | ||||||||
Construct_product | WBCnstr00034195 | ||||||||
Microarray_results (15) | |||||||||
Expression_cluster (91) | |||||||||
Interaction (107) | |||||||||
Map_info | Map | II | Position | 0.770574 | Error | 0.000498 | |||
Positive | Positive_clone | F49E12 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005337 | ||||||||
WBPaper00027315 | |||||||||
WBPaper00030888 | |||||||||
WBPaper00033175 | |||||||||
WBPaper00038491 | |||||||||
Remark | Sequence connection from [Jones D, Crowe E, Stevens TA, Candido EPM], 02/06/10 krb. | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |