WormBase Tree Display for Gene: WBGene00006715
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WBGene00006715 | SMap | S_parent | Sequence | F40G9 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ubc | ||||||
Allele (82) | |||||||
Strain | WBStrain00002957 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00097844 | ||||||
00097845 | |||||||
00097846 | |||||||
00097847 | |||||||
00097848 | |||||||
00097849 | |||||||
00097850 | |||||||
00097851 | |||||||
00097852 | |||||||
Contained_in_operon | CEOP3016 | ||||||
Ortholog (30) | |||||||
Paralog (19) | |||||||
Structured_description | Automated_description | Predicted to enable ubiquitin conjugating enzyme activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein polyubiquitination. Predicted to be located in nucleus. Is an ortholog of human UBE2K (ubiquitin conjugating enzyme E2 K). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F40G9.3 | |||||
Corresponding_transcript | F40G9.3.1 | ||||||
Other_sequence (56) | |||||||
Associated_feature | WBsf644906 | ||||||
WBsf658543 | |||||||
WBsf991002 | |||||||
WBsf1014024 | |||||||
WBsf224344 | |||||||
WBsf224345 | |||||||
WBsf224346 | |||||||
Experimental_info | RNAi_result (18) | ||||||
Expr_pattern | Expr6019 | ||||||
Expr1010829 | |||||||
Expr1032798 | |||||||
Expr1150780 | |||||||
Expr2017707 | |||||||
Expr2035845 | |||||||
Drives_construct | WBCnstr00003463 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (88) | |||||||
Interaction (109) | |||||||
Map_info | Map | III | Position | -26.9218 | Error | 0.00178 | |
Positive | Positive_clone | F40G9 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference (12) | |||||||
Remark | Sequence connection from [Jones D, Crowe E, Stevens TA, Candido EPM], 02/06/10 krb. | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |