WormBase Tree Display for Gene: WBGene00006710
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| WBGene00006710 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ubc-15 | Person_evidence | WBPerson89 | |||||
| Sequence_name | Y110A2AR.2 | ||||||||
| Molecular_name (27) | |||||||||
| Other_name | Y110A2AM.a | ||||||||
| Y110A2AM.b | |||||||||
| CELE_Y110A2AR.2 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | ubc-15 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 03 Mar 2017 00:18:26 | WBPerson1983 | Event | Acquires_merge | WBGene00022449 | ||||
| Acquires_merge | WBGene00022449 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ubc | ||||||||
| Allele (248) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00094281 | ||||||||
| Contained_in_operon | CEOP2076 | ||||||||
| Ortholog (26) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Concise_description | ubc-15 encodes an E2 ubiquitin-conjugating enzyme predicted to mediate the covalent attachment of an activated ubiquityl moiety to a substrate protein; as loss of UBC-15 activity via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of UBC-15 in C. elegans development and/or behavior is not yet known; by sequence similarity, however, UBC-15 is predicted to function in protein modification and turnover. | Paper_evidence | WBPaper00005337 | |||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables ubiquitin protein ligase binding activity. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y110A2AR.2a | |||||||
| Y110A2AR.2b | |||||||||
| Y110A2AR.2c | |||||||||
| Y110A2AR.2d | |||||||||
| Y110A2AR.2e | |||||||||
| Y110A2AR.2f | |||||||||
| Y110A2AR.2g | |||||||||
| Y110A2AR.2h | |||||||||
| Y110A2AR.2i | |||||||||
| Corresponding_transcript | Y110A2AR.2a.1 | ||||||||
| Y110A2AR.2b.1 | |||||||||
| Y110A2AR.2c.1 | |||||||||
| Y110A2AR.2d.1 | |||||||||
| Y110A2AR.2e.1 | |||||||||
| Y110A2AR.2f.1 | |||||||||
| Y110A2AR.2g.1 | |||||||||
| Y110A2AR.2h.1 | |||||||||
| Y110A2AR.2i.1 | |||||||||
| Other_sequence (35) | |||||||||
| Associated_feature | WBsf665415 | ||||||||
| WBsf987095 | |||||||||
| WBsf1011791 | |||||||||
| WBsf222814 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019854 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055309 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019858 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00115278 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036545 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019855 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082826 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094644 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076754 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019853 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010445 | ||||||||
| Expr1010996 | |||||||||
| Expr1032793 | |||||||||
| Expr1039914 | |||||||||
| Expr1158844 | |||||||||
| Expr1158848 | |||||||||
| Expr2017701 | |||||||||
| Expr2035839 | |||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (114) | |||||||||
| Interaction | WBInteraction000523739 | ||||||||
| WBInteraction000541647 | |||||||||
| WBInteraction000546292 | |||||||||
| WBInteraction000546294 | |||||||||
| WBInteraction000546349 | |||||||||
| WBInteraction000546467 | |||||||||
| WBInteraction000546511 | |||||||||
| WBInteraction000546650 | |||||||||
| WBInteraction000546865 | |||||||||
| Map_info | Map | II | Position | -9.34753 | Error | 0.028128 | |||
| Positive | Positive_clone | Y110A2AR | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005337 | ||||||||
| WBPaper00026844 | |||||||||
| WBPaper00027315 | |||||||||
| WBPaper00030888 | |||||||||
| WBPaper00033175 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection from [Jones D, Crowe E, Stevens TA, Candido EPM], 02/06/10 krb. | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
