WormBase Tree Display for Gene: WBGene00006591
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| WBGene00006591 | SMap | S_parent | Sequence | T24A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | toh-1 | Person_evidence | WBPerson465 | |||||
| Sequence_name | T24A11.3 | ||||||||
| Molecular_name | T24A11.3 | ||||||||
| T24A11.3.1 | |||||||||
| CE35909 | |||||||||
| Other_name | nas-26 | CGC_data_submission | |||||||
| CELE_T24A11.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | toh-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | toh | ||||||||
| Allele (55) | |||||||||
| Legacy_information | [Padgett RW] homologous to tolloid and BMP-1 regulatory metalloproteases | ||||||||
| [C.elegansII] NMK. Encodes protein with similarity to tolloid and BMP-1 regulatory metalloproteases [LT] | |||||||||
| Strain | WBStrain00002604 | ||||||||
| WBStrain00047629 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (48) | |||||||||
| Structured_description | Concise_description | toh-1 encodes an astacin-like metalloprotease; TOH-1 is predicted to function as a secreted protease; experiments that specifically assessed toh-1's role in molting indicate that toh-1(RNAi) causes no abnormal phenotypes. | Paper_evidence | WBPaper00006254 | |||||
| WBPaper00024242 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 21 Aug 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in molting cycle and proteolysis. Predicted to be located in extracellular region. Expressed in arcade cell; egg-laying apparatus; hyp7 syncytium; intestine; and neuronal sheath cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T24A11.3 | |||||||
| Corresponding_CDS_history | T24A11.3:wp98 | ||||||||
| T24A11.3:wp111 | |||||||||
| Corresponding_transcript | T24A11.3.1 | ||||||||
| Other_sequence (34) | |||||||||
| Associated_feature | WBsf666697 | ||||||||
| WBsf991913 | |||||||||
| WBsf991914 | |||||||||
| WBsf1014641 | |||||||||
| WBsf226406 | |||||||||
| WBsf226407 | |||||||||
| WBsf226408 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053997 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00019114 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053996 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019115 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061413 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006450 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001252 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006065 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1264 | ||||||||
| Expr8923 | |||||||||
| Expr1015581 | |||||||||
| Expr1032724 | |||||||||
| Expr1157541 | |||||||||
| Expr2017450 | |||||||||
| Expr2035589 | |||||||||
| Drives_construct | WBCnstr00003162 | ||||||||
| WBCnstr00013618 | |||||||||
| WBCnstr00034284 | |||||||||
| Construct_product | WBCnstr00013618 | ||||||||
| WBCnstr00034284 | |||||||||
| Microarray_results (33) | |||||||||
| Expression_cluster (203) | |||||||||
| Interaction | WBInteraction000351779 | ||||||||
| WBInteraction000376267 | |||||||||
| Map_info | Map | III | Position | -4.25169 | Error | 9.7e-05 | |||
| Positive | Positive_clone | T24A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Negative | Negative_clone | W05C8 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002539 | ||||||||
| WBPaper00006254 | |||||||||
| WBPaper00015234 | |||||||||
| WBPaper00015235 | |||||||||
| WBPaper00024242 | |||||||||
| WBPaper00039120 | |||||||||
| WBPaper00047343 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
