WormBase Tree Display for Gene: WBGene00006408
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WBGene00006408 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T14G12 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tag | ||||||
Allele (40) | |||||||
Strain | WBStrain00003306 | ||||||
WBStrain00035574 | |||||||
WBStrain00035577 | |||||||
WBStrain00035726 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (27) | |||||||
Paralog | WBGene00014826 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | |||||||
Structured_description | Automated_description | Enriched in ABalppappa; ABarappppa; germ line; intestine; and muscle cell based on proteomic; Chronogram; tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by fifteen chemicals including D-glucose; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T14G12.3 | |||||
Corresponding_transcript | T14G12.3.1 | ||||||
Other_sequence (67) | |||||||
Associated_feature (11) | |||||||
Experimental_info | RNAi_result | WBRNAi00018724 | Inferred_automatically | RNAi_primary | |||
WBRNAi00053341 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00035578 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern (7) | |||||||
Drives_construct | WBCnstr00003777 | ||||||
WBCnstr00034368 | |||||||
Construct_product | WBCnstr00034368 | ||||||
Antibody | WBAntibody00000164 | ||||||
Microarray_results (18) | |||||||
Expression_cluster (228) | |||||||
Interaction (27) | |||||||
Map_info | Map | X | Position | -9.6372 | Error | 0.03819 | |
Positive | Positive_clone | T14G12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4310 | |||||
5649 | |||||||
Pseudo_map_position | |||||||
Remark | Gene name created from parsing 'genotype' field from CGC strain information | CGC_data_submission | |||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |