WormBase Tree Display for Gene: WBGene00006391
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WBGene00006391 | SMap | S_parent | Sequence | T12D8 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | taf | ||||||
Allele (22) | |||||||
Strain | WBStrain00037163 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (13) | |||||||
Contained_in_operon | CEOP3816 | ||||||
Ortholog (32) | |||||||
Paralog | WBGene00008458 | Caenorhabditis elegans | From_analysis | Panther | |||
Structured_description | Automated_description | Predicted to enable transcription coactivator activity. Predicted to contribute to RNA polymerase II general transcription initiation factor activity. Involved in embryo development; positive regulation of transcription by RNA polymerase II; and regulation of mitotic cell cycle, embryonic. Located in nucleus. Is an ortholog of human TAF9 (TATA-box binding protein associated factor 9). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T12D8.7 | |||||
Corresponding_transcript | T12D8.7.1 | ||||||
Other_sequence (24) | |||||||
Associated_feature (2) | |||||||
Transcription_factor | WBTranscriptionFactor000206 | ||||||
WBTranscriptionFactor000476 | |||||||
Experimental_info | RNAi_result (35) | ||||||
Expr_pattern | Expr1016294 | ||||||
Expr1032588 | |||||||
Expr1156797 | |||||||
Expr2017221 | |||||||
Expr2035357 | |||||||
Drives_construct | WBCnstr00034376 | ||||||
Construct_product | WBCnstr00034376 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (104) | |||||||
Interaction (115) | |||||||
Map_info | Map | III | Position | 21.3023 | Error | 0.001742 | |
Positive | Positive_clone | T12D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00004890 | ||||||
WBPaper00005725 | |||||||
WBPaper00006475 | |||||||
WBPaper00018966 | |||||||
WBPaper00027309 | |||||||
WBPaper00029038 | |||||||
WBPaper00038491 | |||||||
WBPaper00040120 | |||||||
WBPaper00055090 | |||||||
WBPaper00065308 | |||||||
Remark | Sequence connection updated from [Blackwell TK] | ||||||
This gene was previously called taf-10 [krb 020614] | |||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |