WormBase Tree Display for Gene: WBGene00006308
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| WBGene00006308 | Evidence | Person_evidence | WBPerson1705 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| CGC_data_submission | |||||||||
| SMap | S_parent | Sequence | K09C4 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | sul-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | K09C4.8 | ||||||||
| Molecular_name | K09C4.8 | ||||||||
| K09C4.8.1 | |||||||||
| CE04736 | |||||||||
| Other_name | tag-37 | CGC_data_submission | |||||||
| CELE_K09C4.8 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | sul-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sul | ||||||||
| Allele (54) | |||||||||
| Strain | WBStrain00035606 | ||||||||
| WBStrain00005128 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00006309 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00006310 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | sul-1 encodes the sole C. elegans 6-O-endosulfatase; by homology, SUL-1 is predicted to function in enzymatic removal of the 6-O-sulfate group of heparan sulfate; accordingly, loss-of-function mutations in sul-1 result in increased heparan sulfate 6-O-sulfation. | Paper_evidence | WBPaper00038286 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| Date_last_updated | 05 Apr 2011 00:00:00 | ||||||||
| Automated_description | Enables heparan sulfate 6-O-sulfotransferase activity. Involved in heparan sulfate proteoglycan biosynthetic process, enzymatic modification. Predicted to be located in Golgi stack; cell surface; and endoplasmic reticulum. Is an ortholog of human SULF1 (sulfatase 1) and SULF2 (sulfatase 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K09C4.8 | |||||||
| Corresponding_transcript | K09C4.8.1 | ||||||||
| Other_sequence (34) | |||||||||
| Associated_feature | WBsf653822 | ||||||||
| WBsf653823 | |||||||||
| WBsf670309 | |||||||||
| WBsf1004572 | |||||||||
| WBsf1004573 | |||||||||
| WBsf237166 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00050387 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016883 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034192 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018265 | ||||||||
| Expr1032549 | |||||||||
| Expr1154091 | |||||||||
| Expr2017109 | |||||||||
| Expr2035245 | |||||||||
| Drives_construct | WBCnstr00016113 | ||||||||
| WBCnstr00034402 | |||||||||
| Construct_product | WBCnstr00034402 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (137) | |||||||||
| Interaction | WBInteraction000110414 | ||||||||
| WBInteraction000276308 | |||||||||
| WBInteraction000434840 | |||||||||
| WBInteraction000451887 | |||||||||
| WBInteraction000474447 | |||||||||
| Map_info | Map | X | Position | -10.6076 | Error | 0.029617 | |||
| Positive | Positive_clone | K09C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033646 | ||||||||
| WBPaper00035539 | |||||||||
| WBPaper00038286 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00039168 | |||||||||
| WBPaper00053559 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059755 | |||||||||
| WBPaper00061415 | |||||||||
| Remark | Locus name from allele gk151 of Knock out consortium [030204 ck1] | ||||||||
| Gene name created from parsing 'genotype' field from CGC strain information | CGC_data_submission | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
