WormBase Tree Display for Gene: WBGene00005908
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WBGene00005908 | SMap | S_parent | Sequence | CHROMOSOME_V | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | ||||||||
Name | CGC_name | srx-17 | Person_evidence | WBPerson522 | ||||||
Sequence_name | F55B12.8 | |||||||||
Molecular_name | F55B12.8 | |||||||||
F55B12.8.1 | ||||||||||
CE52301 | ||||||||||
Other_name | CELE_F55B12.8 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | srx-17 | |||||||||
DB_info | Database | AceView | gene | 5O317 | ||||||
WormFlux | gene | WBGene00005908 | ||||||||
NDB | locus_tag | CELE_F55B12.8 | ||||||||
Panther | gene | CAEEL|WormBase=WBGene00005908|UniProtKB=G5EF94 | ||||||||
family | PTHR23017 | |||||||||
NCBI | gene | 186284 | ||||||||
RefSeq | protein | NM_001356749.3 | ||||||||
TREEFAM | TREEFAM_ID | TF315574 | ||||||||
TrEMBL | UniProtAcc | G5EF94 | ||||||||
UniProt_GCRP | UniProtAcc | G5EF94 | ||||||||
Species | Caenorhabditis elegans | |||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
2 | 22 Nov 2007 15:14:44 | WBPerson4025 | Event | Changed_class | Pseudogene | CDS | ||||
Status | Live | |||||||||
Gene_info | Biotype | SO:0001217 | ||||||||
Gene_class | srx | |||||||||
Allele (19) | ||||||||||
RNASeq_FPKM (74) | ||||||||||
GO_annotation | 00016702 | |||||||||
Ortholog (49) | ||||||||||
Paralog (96) | ||||||||||
Structured_description | Automated_description | Predicted to be located in membrane. Expressed in ASIL; ASIR; PVT; and ventral ganglion. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | |||||||||
WBPerson37462 | ||||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | |||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | |||||||||
Molecular_info | Corresponding_CDS | F55B12.8 | ||||||||
Corresponding_CDS_history | F55B12.8:wp117 | |||||||||
F55B12.8:wp261 | ||||||||||
Corresponding_transcript | F55B12.8.1 | |||||||||
Corresponding_pseudogene_history | F55B12.8:wp185 | |||||||||
Associated_feature | WBsf1001897 | |||||||||
WBsf1001898 | ||||||||||
WBsf1001899 | ||||||||||
WBsf1020765 | ||||||||||
WBsf1020766 | ||||||||||
WBsf1020767 | ||||||||||
Experimental_info | RNAi_result | WBRNAi00015698 | Inferred_automatically | RNAi_primary | ||||||
WBRNAi00048456 | Inferred_automatically | RNAi_primary | ||||||||
Expr_pattern | Expr14181 | |||||||||
Expr1152245 | ||||||||||
Microarray_results | SMD_F55B12.8 | |||||||||
191372_at | ||||||||||
A_12_P104001 | ||||||||||
Aff_F55B12.8 | ||||||||||
GPL19516_CGZ0024207 | ||||||||||
GPL21109_F55B12.8 | ||||||||||
Expression_cluster (19) | ||||||||||
SAGE_tag (2) | ||||||||||
Map_info | Map | V | Position | 5.68679 | Error | 0.000551 | ||||
Positive | Positive_clone | F55B12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
Pseudo_map_position | ||||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |