WormBase Tree Display for Gene: WBGene00005651
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WBGene00005651 | SMap | S_parent | Sequence | F09C6 | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | ||||||||
Name | CGC_name | srp-10 | Person_evidence | WBPerson1460 | ||||||
Sequence_name | F09C6.4 | |||||||||
Molecular_name | F09C6.4 | |||||||||
Other_name | CELE_F09C6.4 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | srp-10 | |||||||||
DB_info | Database | AceView | gene | 5R377 | ||||||
WormQTL | gene | WBGene00005651 | ||||||||
NDB | locus_tag | CELE_F09C6.4 | ||||||||
NCBI | gene | 191962 | ||||||||
Species | Caenorhabditis elegans | |||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:38 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
2 | 04 Jan 2006 17:29:21 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
Status | Live | |||||||||
Gene_info | Biotype | SO:0000336 | ||||||||
Gene_class | srp | |||||||||
Allele (84) | ||||||||||
Strain | WBStrain00031435 | |||||||||
RNASeq_FPKM (74) | ||||||||||
Paralog | WBGene00005647 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
Structured_description | Automated_description | Enriched in male based on RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on RNA-seq and microarray studies. Is affected by eight chemicals including aldicarb; methylmercuric chloride; and Rifampin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | |||||||||
WBPerson37462 | ||||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
Molecular_info | Corresponding_CDS_history | F09C6.4:wp153 | ||||||||
Corresponding_pseudogene | F09C6.4 | |||||||||
Experimental_info | Microarray_results | SMD_F09C6.4 | ||||||||
SMD_F09C6.4:2 | ||||||||||
193925_at | ||||||||||
A_12_P114952 | ||||||||||
Aff_F09C6.4 | ||||||||||
GPL19516_CGZ0015083 | ||||||||||
GPL21109_F09C6.4 | ||||||||||
GPL3518_CE15763 | ||||||||||
GPL9450_F09C6.4 | ||||||||||
cea2.d.02061 | ||||||||||
Expression_cluster (41) | ||||||||||
Map_info | Map | V | Position | 11.3015 | Error | 0.011605 | ||||
Positive | Positive_clone | F09C6 | Inferred_automatically | From CDS info | ||||||
From sequence, transcript, pseudogene data | ||||||||||
Mapping_data | Multi_point | 4703 | ||||||||
4704 | ||||||||||
5410 | ||||||||||
Pseudo_map_position | ||||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |