WormBase Tree Display for Gene: WBGene00005192
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| WBGene00005192 | SMap | S_parent | Sequence | C55A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | srg-35 | Person_evidence | WBPerson42 | |||||
| Sequence_name | C55A1.2 | ||||||||
| Molecular_name | C55A1.2 | ||||||||
| Other_name | CELE_C55A1.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srg-35 | ||||||||
| DB_info | Database | AceView | gene | 5Q97b | |||||
| WormQTL | gene | WBGene00005192 | |||||||
| NDB | locus_tag | CELE_C55A1.2 | |||||||
| NCBI | gene | 13217047 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Gene_class | srg | ||||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Paralog | WBGene00005191 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
| Structured_description | Automated_description | Is affected by eat-2; etr-1; and sir-2.1 based on RNA-seq and microarray studies. Is affected by six chemicals including metformin; Sirolimus; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS_history | C55A1.2:wp93 | |||||||
| Corresponding_pseudogene | C55A1.2 | ||||||||
| Experimental_info | Microarray_results | SMD_C55A1.2 | |||||||
| 178763_at | |||||||||
| A_12_P143735 | |||||||||
| Aff_C55A1.2 | |||||||||
| GPL19516_CGZ0010657 | |||||||||
| GPL21109_C55A1.2 | |||||||||
| GPL3518_CE08988 | |||||||||
| Expression_cluster | WBPaper00055354:eat-2(ad1116)_downregulated | ||||||||
| WBPaper00055354:Rapamycin-Metformin_downregulated | |||||||||
| WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated | |||||||||
| WBPaper00055354:Rapamycin-Rifampicin_downregulated | |||||||||
| WBPaper00055354:Rifampicin-Psora_downregulated | |||||||||
| WBPaper00061527:sre-33-ZK1025.1_8337 | |||||||||
| WBPaper00062325:muscle_depleted_noncoding-RNA | |||||||||
| WBPaper00026929:Resveratrol_regulated_daf-16 | |||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | |||||||||
| WBPaper00048989:eat-2(ad465)_rapamycin_upregulated | |||||||||
| Map_info | Map | V | Position | 8.46571 | Error | 0.004108 | |||
| Positive | Positive_clone | C55A1 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
