WormBase Tree Display for Gene: WBGene00004965
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| WBGene00004965 | SMap | S_parent | Sequence | F48C1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | spe-11 | Person_evidence | WBPerson252 | |||||
| Sequence_name | F48C1.7 | ||||||||
| Molecular_name | F48C1.7 | ||||||||
| F48C1.7.1 | |||||||||
| CE10744 | |||||||||
| Other_name | CELE_F48C1.7 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | spe-11 | ||||||||
| DB_info | Database | AceView | gene | 1F900 | |||||
| WormQTL | gene | WBGene00004965 | |||||||
| WormFlux | gene | WBGene00004965 | |||||||
| NDB | locus_tag | CELE_F48C1.7 | |||||||
| NCBI | gene | 172179 | |||||||
| RefSeq | protein | NM_059168.5 | |||||||
| SwissProt | UniProtAcc | P54217 | |||||||
| UniProt_GCRP | UniProtAcc | P54217 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | spe | ||||||||
| Allele (26) | |||||||||
| Legacy_information | hc77ts : hermaphrodites and males grown at 25x produce motile sperm that are fertilization defective. Self-fertility 3% (25x) 100% (16x). Similar phenotype in hc77/Df. ES2 (adult). NA2 (hc90 (nonconditional sterile)). | ||||||||
| [C.elegansII] hc77ts : hermaphrodites and males grown at 25C produce motile sperm that are fertilize oocytes leading to abnormal early development.defective. Self-fertility 3% (25C) 100% (16C). Similar phenotype in hc77/Df. ES2 (adult). OA3: hc90 (nonconditional sterile). Cloned: encodes 299 aa novel protein, highly charged and hydrophilic; transcript only in sperm, but forced expression in oocyte can rescue Spe phenotype. SPE-11 in perinuclear halo of mature sperm. [Hill et al. 1989; SS] | |||||||||
| Strain | WBStrain00036837 | ||||||||
| WBStrain00036944 | |||||||||
| WBStrain00000382 | |||||||||
| WBStrain00000394 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00048245 | ||||||||
| 00048246 | |||||||||
| 00048247 | |||||||||
| 00048248 | |||||||||
| 00048249 | |||||||||
| 00048250 | |||||||||
| 00048251 | |||||||||
| 00048252 | |||||||||
| Ortholog (20) | |||||||||
| Structured_description | Concise_description | spe-11 encodes a novel protein that is required for early embryonic development and for regulating the dynamic morphology of sperm pseudopods; SPE-11 is one of the few paternally provided proteins known to be essential for embryogenesis; SPE-11 is first detected in the nuclei of primary spermatocytes and then remains tightly associated with sperm chromatin until fertilization at which point it appears to be degraded. | Paper_evidence | WBPaper00002383 | |||||
| WBPaper00002802 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 16 Nov 2010 00:00:00 | ||||||||
| Automated_description | Involved in eggshell formation and prevention of polyspermy. Located in nucleus. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F48C1.7 | |||||||
| Corresponding_transcript | F48C1.7.1 | ||||||||
| Other_sequence | CBC03713_1 | ||||||||
| Associated_feature | WBsf983661 | ||||||||
| WBsf219409 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047730 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00027663 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003717 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1591 | ||||||||
| Expr1018335 | |||||||||
| Expr1151562 | |||||||||
| Expr2016031 | |||||||||
| Expr2034266 | |||||||||
| Drives_construct | WBCnstr00005275 | ||||||||
| WBCnstr00005335 | |||||||||
| WBCnstr00005392 | |||||||||
| WBCnstr00009226 | |||||||||
| WBCnstr00018538 | |||||||||
| WBCnstr00022859 | |||||||||
| WBCnstr00022864 | |||||||||
| WBCnstr00035302 | |||||||||
| WBCnstr00041647 | |||||||||
| Construct_product | WBCnstr00005236 | ||||||||
| WBCnstr00035302 | |||||||||
| WBCnstr00041647 | |||||||||
| WBCnstr00041648 | |||||||||
| WBCnstr00041649 | |||||||||
| WBCnstr00041650 | |||||||||
| WBCnstr00041651 | |||||||||
| Antibody | WBAntibody00001508 | ||||||||
| WBAntibody00001577 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (219) | |||||||||
| Interaction (273) | |||||||||
| WBProcess | WBbiopr:00000067 | ||||||||
| Map_info | Map | I | Position | -0.116311 | Error | 0.006226 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | F48C1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| F52B8 | |||||||||
| Mapping_data | 2_point | 3198 | |||||||
| Multi_point | 1047 | ||||||||
| 1048 | |||||||||
| 2097 | |||||||||
| 3115 | |||||||||
| 3116 | |||||||||
| Pos_neg_data (13) | |||||||||
| Reference (45) | |||||||||
| Method | Gene |
