WormBase Tree Display for Gene: WBGene00004810
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WBGene00004810 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y60A3A | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | skr-4 | Person_evidence | WBPerson322 | |||||
Sequence_name | Y60A3A.18 | ||||||||
Molecular_name | Y60A3A.18 | ||||||||
Y60A3A.18.1 | |||||||||
CE24523 | |||||||||
Other_name | CELE_Y60A3A.18 | Accession_evidence | NDB | BX284605 | |||||
Public_name | skr-4 | ||||||||
DB_info | Database | AceView | gene | 5U393 | |||||
WormQTL | gene | WBGene00004810 | |||||||
WormFlux | gene | WBGene00004810 | |||||||
NDB | locus_tag | CELE_Y60A3A.18 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004810|UniProtKB=Q9U1Y9 | |||||||
family | PTHR11165 | ||||||||
NCBI | gene | 191762 | |||||||
RefSeq | protein | NM_075456.7 | |||||||
TREEFAM | TREEFAM_ID | TF354233 | |||||||
TrEMBL | UniProtAcc | Q9U1Y9 | |||||||
UniProt_GCRP | UniProtAcc | Q9U1Y9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | skr | ||||||||
Allele (56) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00098536 | ||||||||
00098537 | |||||||||
00098538 | |||||||||
00098539 | |||||||||
00098540 | |||||||||
00113217 | |||||||||
Ortholog (64) | |||||||||
Paralog (19) | |||||||||
Structured_description | Concise_description | The skr-4 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-4(RNAi) animals are at least superficially normal. | Paper_evidence | WBPaper00005128 | |||||
WBPaper00005129 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Expressed in intestine. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y60A3A.18 | |||||||
Corresponding_transcript | Y60A3A.18.1 | ||||||||
Associated_feature | WBsf1003388 | ||||||||
WBsf1021843 | |||||||||
Experimental_info (7) | |||||||||
Map_info | Map | V | Position | 23.9984 | Error | 0.009899 | |||
Positive | Positive_clone | Y60A3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (7) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |