WormBase Tree Display for Gene: WBGene00004807
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| WBGene00004807 | Evidence | CGC_data_submission | |||||
|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_I | ||||
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | skr | ||||||
| Allele (14) | |||||||
| Strain | WBStrain00036440 | ||||||
| WBStrain00005195 | |||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation (32) | |||||||
| Ortholog (44) | |||||||
| Paralog (19) | |||||||
| Structured_description | Concise_description | The skr-1 gene encodes a homolog of Skp1 in S. cerevisiae that is required for the restraint of cell proliferation, progression through the pachytene stage of meiosis, and the formation of bivalent chromosomes at diakinesis. | Paper_evidence (2) | ||||
| Curator_confirmed | WBPerson567 | ||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
| Automated_description | Predicted to enable cullin family protein binding activity. Involved in several processes, including negative regulation of intracellular signal transduction; regulation of cellular component organization; and regulation of protein stability. Predicted to be located in cytoplasm and nucleus. Expressed in several structures, including pharynx and spermatheca. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | F46A9.5 | |||||
| Corresponding_transcript | F46A9.5.1 | ||||||
| Other_sequence (144) | |||||||
| Associated_feature | WBsf643588 | ||||||
| WBsf643589 | |||||||
| WBsf656751 | |||||||
| WBsf656752 | |||||||
| WBsf984704 | |||||||
| WBsf218286 | |||||||
| WBsf218287 | |||||||
| WBsf218288 | |||||||
| WBsf218289 | |||||||
| Experimental_info | RNAi_result (53) | ||||||
| Expr_pattern | Expr2437 | ||||||
| Expr13172 | |||||||
| Expr1013389 | |||||||
| Expr1032386 | |||||||
| Expr1151310 | |||||||
| Expr2015847 | |||||||
| Expr2034080 | |||||||
| Drives_construct | WBCnstr00010827 | ||||||
| WBCnstr00035375 | |||||||
| Construct_product | WBCnstr00010827 | ||||||
| WBCnstr00035375 | |||||||
| WBCnstr00039337 | |||||||
| Regulate_expr_cluster | WBPaper00050332:skr-1(RNAi)-skr-2(RNAi)_downregulated | ||||||
| Antibody | WBAntibody00002336 | ||||||
| WBAntibody00002337 | |||||||
| Microarray_results (24) | |||||||
| Expression_cluster (98) | |||||||
| Interaction (235) | |||||||
| WBProcess | WBbiopr:00000068 | ||||||
| Map_info | Map | I | Position | 3.76789 | Error | 0.000506 | |
| Positive | Positive_clone | F46A9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Reference (31) | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
