WormBase Tree Display for Gene: WBGene00004483
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WBGene00004483 | SMap | S_parent | Sequence | F37C12 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rps | ||||||
Allele (15) | |||||||
Legacy_information | Orthologous to yeast (S.cerevisiae) ribosomal protein rps14 using blastP | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (17) | |||||||
Ortholog (39) | |||||||
Paralog | WBGene00012244 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
Structured_description | Concise_description | rps-14 encodes a small ribosomal subunit S14 protein; by homology, RPS-14 is predicted to function in protein biosynthesis; in C. elegans, RPS-14 activity is required for embryonic and germline development, as well as the overall health of the animal; RPS-14 co-immuoprecipitates with ALG-1, a C. elegans Argonaut ortholog. | Paper_evidence | WBPaper00004403 | |||
WBPaper00005654 | |||||||
WBPaper00034755 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 03 Sep 2012 00:00:00 | ||||||
Automated_description | Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal small subunit assembly and translation. Predicted to be located in cytoplasm; nucleolus; and ribosome. Predicted to be part of cytosolic small ribosomal subunit and small-subunit processome. Expressed in tail. Human ortholog(s) of this gene implicated in chromosome 5q deletion syndrome. Is an ortholog of human RPS14 (ribosomal protein S14). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed (2) | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model | DOID:0090016 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10387) | ||
Molecular_info | Corresponding_CDS | F37C12.9 | |||||
Corresponding_transcript | F37C12.9.1 | ||||||
Other_sequence (333) | |||||||
Associated_feature | WBsf651179 | ||||||
WBsf667044 | |||||||
WBsf667045 | |||||||
WBsf226924 | |||||||
Experimental_info | RNAi_result (28) | ||||||
Expr_pattern | Expr5983 | ||||||
Expr1015336 | |||||||
Expr1032286 | |||||||
Expr1150501 | |||||||
Expr2015508 | |||||||
Expr2033743 | |||||||
Drives_construct | WBCnstr00002450 | ||||||
WBCnstr00035450 | |||||||
Construct_product | WBCnstr00035450 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (175) | |||||||
Interaction (238) | |||||||
Map_info | Map | III | Position | -0.776434 | Error | 0.00013 | |
Positive | Positive_clone | F37C12 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00005356 | ||||||
WBPaper00028564 | |||||||
WBPaper00034755 | |||||||
WBPaper00035149 | |||||||
WBPaper00035215 | |||||||
WBPaper00038491 | |||||||
WBPaper00049828 | |||||||
WBPaper00055090 | |||||||
WBPaper00060474 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |