WormBase Tree Display for Gene: WBGene00004279

WBGene00004279 SMap: S_parent: Sequence: T01B7
  Identity: Version: 1
    Name: CGC_name: rab-21 Person_evidence: WBPerson451
      Sequence_name: T01B7.3
      Molecular_name: T01B7.3
        T01B7.3.1
        CE03587
      Other_name: CELE_T01B7.3 Accession_evidence: NDB BX284602
      Public_name: rab-21
    DB_info: Database: AceView gene 2J2
        WormQTL gene WBGene00004279
        WormFlux gene WBGene00004279
        NDB locus_tag CELE_T01B7.3
        Panther gene CAEEL|WormBase=WBGene00004279|UniProtKB=Q22045
          family PTHR24073
        NCBI gene 187932
        RefSeq protein NM_063453.5
        TrEMBL UniProtAcc Q22045
        UniProt_GCRP UniProtAcc Q22045
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rab
    Allele (21)
    Strain: WBStrain00036551
    RNASeq_FPKM (74)
    GO_annotation: 00073920
      00073921
      00073922
      00073923
      00073924
      00112600
      00112601
    Contained_in_operon: CEOP2388
    Ortholog (34)
    Paralog (32)
    Structured_description: Concise_description: rab-21 encodes a Rab GTPase most closely related to the Drosophila and vertebrate Rab21 GTPases and Saccharomyces cerevisiae VPS21; by homology, RAB-21 is predicted to be involved in membrane trafficking/vesicle transport; loss of rab-21 activity via RNAi results in 7-8% embryonic lethality. Paper_evidence: WBPaper00024925
          Curator_confirmed: WBPerson1843
          Date_last_updated: 12 Dec 2007 00:00:00
      Automated_description: Predicted to enable GTPase activity. Predicted to be involved in intracellular protein transport. Predicted to be located in early endosome. Is an ortholog of human RAB21 (RAB21, member RAS oncogene family). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T01B7.3
    Corresponding_transcript: T01B7.3.1
    Other_sequence (20)
    Associated_feature: WBsf223539
  Experimental_info: RNAi_result: WBRNAi00107747 Inferred_automatically: RNAi_primary
      WBRNAi00017939 Inferred_automatically: RNAi_primary
      WBRNAi00034999 Inferred_automatically: RNAi_primary
      WBRNAi00061641 Inferred_automatically: RNAi_primary
      WBRNAi00107748 Inferred_automatically: RNAi_primary
      WBRNAi00052081 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023231
      Expr1032117
      Expr1155713
      Expr2015220
      Expr2033454
    Drives_construct: WBCnstr00035591
    Construct_product: WBCnstr00035591
    Microarray_results (20)
    Expression_cluster (93)
    Interaction (16)
  Map_info: Map: II Position: 0.859375 Error: 0.001431
    Positive: Positive_clone: T01B7 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027296
    WBPaper00029101
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene