WormBase Tree Display for Gene: WBGene00004103
expand all nodes | collapse all nodes | view schema
| WBGene00004103 | SMap | S_parent | Sequence | C09G1 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | CGC_name | pqn-11 | Person_evidence | WBPerson625 | ||||||
| Sequence_name | C09G1.1 | |||||||||
| Molecular_name | C09G1.1 | |||||||||
| Other_name | CELE_C09G1.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | pqn-11 | |||||||||
| DB_info | Database | AceView | gene | XQ582 | ||||||
| WormQTL | gene | WBGene00004103 | ||||||||
| WormFlux | gene | WBGene00004103 | ||||||||
| NDB | locus_tag | CELE_C09G1.1 | ||||||||
| NCBI | gene | 182458 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 20 May 2019 14:51:43 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | pqn | |||||||||
| Allele (127) | ||||||||||
| Strain | WBStrain00037716 | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Structured_description | Concise_description | PQN-11 encodes an unfamiliar protein with a glutamine/asparagine-rich domain that is dispensable for viability and gross morphology. | Paper_evidence | WBPaper00005068 | ||||||
| WBPaper00005654 | ||||||||||
| WBPaper00012788 | ||||||||||
| WBPaper00012830 | ||||||||||
| WBPaper00012882 | ||||||||||
| WBPaper00012897 | ||||||||||
| WBPaper00013003 | ||||||||||
| Curator_confirmed | WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | |||||||||
| Automated_description | Enriched in male-specific anatomical entity based on microarray studies. Is affected by several genes including daf-16; daf-2; and pgl-1 based on microarray and RNA-seq studies. Is affected by six chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C09G1.1:wp131 | ||||||||
| C09G1.1:wp271 | ||||||||||
| Corresponding_pseudogene | C09G1.1 | |||||||||
| Other_sequence | OFC00126_1 | |||||||||
| OF00433 | ||||||||||
| JI472103.1 | ||||||||||
| Associated_feature | WBsf1008391 | |||||||||
| WBsf1008392 | ||||||||||
| WBsf1024688 | ||||||||||
| Experimental_info | Expr_pattern | Expr1024055 | ||||||||
| Expr1144283 | ||||||||||
| Drives_construct | WBCnstr00035694 | |||||||||
| Construct_product | WBCnstr00035694 | |||||||||
| Microarray_results (14) | ||||||||||
| Expression_cluster (73) | ||||||||||
| Interaction (20) | ||||||||||
| Map_info | Map | X | Position | 23.1001 | ||||||
| Positive | Positive_clone | C09G1 | Inferred_automatically | From CDS info | ||||||
| From sequence, transcript, pseudogene data | ||||||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
