WormBase Tree Display for Gene: WBGene00003542
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| WBGene00003542 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nas-23 | Person_evidence | WBPerson1103 | |||||
| Sequence_name | R10H1.5 | ||||||||
| Molecular_name | R10H1.5 | ||||||||
| R10H1.5.1 | |||||||||
| CE38212 | |||||||||
| Other_name | CELE_R10H1.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | nas-23 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00003542 | |||||
| NDB | locus_tag | CELE_R10H1.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003542|UniProtKB=Q7Z0M7 | |||||||
| family | PTHR10127 | ||||||||
| NCBI | gene | 3565992 | |||||||
| RefSeq | protein | NM_001027110.3 | |||||||
| KEGG | KEGG_id | 3.4.24.- | |||||||
| NemaPath | KEGG_id | 3.4.24.- | |||||||
| SwissProt | UniProtAcc | Q7Z0M7 | |||||||
| UniProt_GCRP | UniProtAcc | Q7Z0M7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 19 Aug 2005 13:36:32 | WBPerson2970 | Event | Acquires_merge | WBGene00044118 | ||||
| Acquires_merge | WBGene00044118 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nas | ||||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (27) | |||||||||
| Paralog (48) | |||||||||
| Structured_description | Concise_description | nas-23 encodes an astacin-like metalloprotease. | Paper_evidence | WBPaper00006254 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 15 Feb 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable metalloendopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular region. Expressed in hyp7 syncytium; intestine; pharyngeal muscle cell; and rectum. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R10H1.5 | |||||||
| Corresponding_transcript | R10H1.5.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf223346 | ||||||||
| WBsf223347 | |||||||||
| Experimental_info | Expr_pattern | Expr8921 | |||||||
| Expr1018704 | |||||||||
| Expr1155402 | |||||||||
| Expr2013872 | |||||||||
| Expr2032112 | |||||||||
| Drives_construct | WBCnstr00013616 | ||||||||
| WBCnstr00036057 | |||||||||
| Construct_product | WBCnstr00013616 | ||||||||
| WBCnstr00036057 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (114) | |||||||||
| Interaction | WBInteraction000560272 | ||||||||
| Map_info | Map | II | Position | 0.503362 | Error | 2.2e-05 | |||
| Positive | Positive_clone | R10H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006254 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
