WormBase Tree Display for Gene: WBGene00003509

WBGene00003509 SMap: S_parent: Sequence: T19B10
  Identity: Version: 1
    Name: CGC_name: mxl-1
      Sequence_name: T19B10.11
      Molecular_name: T19B10.11
        T19B10.11.1
        CE16417
      Other_name: CELE_T19B10.11 Accession_evidence: NDB BX284605
      Public_name: mxl-1
    DB_info: Database: AceView gene 5L725
        WormQTL gene WBGene00003509
        WormFlux gene WBGene00003509
        NDB locus_tag CELE_T19B10.11
        Panther gene CAEEL|WormBase=WBGene00003509|UniProtKB=G5EEH5
          family PTHR10328
        NCBI gene 179557
        RefSeq protein NM_073455.7
        SwissProt UniProtAcc G5EEH5
        UniProt_GCRP UniProtAcc G5EEH5
        OMIM gene 154950
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mxl
    Allele (17)
    Legacy_information: [Yuan J, Cole MD] No mutations known. Related to vertebrate MAX transcription factor, MXL-1 can form DNA-binding heterodimer with MDL-1 in vitro. mxl-1::GFP expression strongest in intestinal cells. Predicted gene T19B10.11.
    RNASeq_FPKM (74)
    GO_annotation (18)
    Contained_in_operon: CEOP5280
    Ortholog (28)
    Paralog: WBGene00003511 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description (2)
  Disease_info: Potential_model: DOID:5409 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6913)
      DOID:0050771 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6913)
  Molecular_info: Corresponding_CDS: T19B10.11
    Corresponding_transcript: T19B10.11.1
    Other_sequence (22)
    Associated_feature: WBsf647243
      WBsf978665
      WBsf232485
      WBsf232486
    Transcription_factor: WBTranscriptionFactor000088
      WBTranscriptionFactor000087
  Experimental_info: RNAi_result: WBRNAi00018816 Inferred_automatically: RNAi_primary
      WBRNAi00061886 Inferred_automatically: RNAi_primary
      WBRNAi00115841 Inferred_automatically: RNAi_primary
      WBRNAi00027699 Inferred_automatically: RNAi_primary
      WBRNAi00115664 Inferred_automatically: RNAi_primary
      WBRNAi00053490 Inferred_automatically: RNAi_primary
      WBRNAi00090663 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr701
      Expr1019202
      Expr1031605
      Expr1157055
      Expr2013837
      Expr2032077
    Drives_construct: WBCnstr00012497
      WBCnstr00036082
    Construct_product: WBCnstr00021771
      WBCnstr00036082
    Microarray_results (20)
    Expression_cluster (116)
    SAGE_tag: SAGE:ctcgagaaca Strand: Sense
        Unambiguously_mapped
      SAGE:taaataatat Strand: Antisense
      SAGE:catacacggtagttatt Strand: Antisense
      SAGE:catacacggt Strand: Antisense
      SAGE:ctcgagaacagcacaac Strand: Sense
        Unambiguously_mapped
      SAGE:ctcaataatgtaatgta Strand: Sense
        Unambiguously_mapped
      SAGE:ctcaataatg Strand: Sense
        Unambiguously_mapped
      SAGE:taaaataact Strand: Antisense
      SAGE:ccgcttcgga Strand: Antisense
    Interaction (12)
  Map_info: Map: V Position: 3.0135 Error: 0.004779
    Positive: Positive_clone: T19B10 Author_evidence: Yuan JY
            Cole MD
          Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4855
        4822
        4225
        4437
    Pseudo_map_position
  Reference (15)
  Remark: Data extracted from Yuan et al. (1998)
    Old name connection to max-1 removed according to [Huang X, Jin Y]. [krb 020614]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene