WormBase Tree Display for Gene: WBGene00003333
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WBGene00003333 | Evidence | Paper_evidence | WBPaper00005879 | |||
---|---|---|---|---|---|---|
WBPaper00005825 | ||||||
SMap | S_parent | Sequence | C34E11 | |||
Identity (6) | ||||||
Gene_info | Biotype | SO:0001265 | ||||
Gene_class | mir | |||||
Allele | WBVar01499887 | |||||
WBVar01499888 | ||||||
WBVar01499710 | ||||||
WBVar02123435 | ||||||
WBVar00518188 | ||||||
WBVar02123487 | ||||||
WBVar00323168 | ||||||
WBVar02123334 | ||||||
WBVar01498960 | ||||||
WBVar01500067 | ||||||
In_cluster | MIR-305 | |||||
RNASeq_FPKM (74) | ||||||
Structured_description | Concise_description | mir-239.2 encodes a microRNA, a small non-protein coding RNA and appears to have a potential ortholog in C. briggsae; miR-239.2 is weakly expressed in the embryo and strongly expressed at all other stages of development in normal worms and in glp-4(bn2) mutant worms; many of the known microRNAs are involved in post-transcriptional regulation of genes. | Paper_evidence | WBPaper00005825 | ||
Curator_confirmed | WBPerson324 | |||||
Date_last_updated | 08 Feb 2005 00:00:00 | |||||
Automated_description | Is affected by several genes including daf-12; eat-2; and prg-1 based on tiling array and RNA-seq studies. Is affected by graphene oxide; sodium arsenite; and paraquat based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_transcript | C34E11.6 | ||||
C34E11.6a | ||||||
C34E11.6b | ||||||
Associated_feature | WBsf1007113 | |||||
WBsf1023937 | ||||||
Experimental_info | Expr_pattern | Expr2514 | ||||
Expr10921 | ||||||
Expression_cluster (36) | ||||||
Interaction | WBInteraction000500576 | |||||
WBInteraction000500577 | ||||||
WBProcess | WBbiopr:00000001 | |||||
Map_info | Positive | Inside_rearr | nDf62 | |||
Positive_clone | C34E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Pos_neg_data | 10936 | ||||
Interpolated_map_position | X | 6.72588 | ||||
Reference | WBPaper00005825 | |||||
WBPaper00024441 | ||||||
WBPaper00031335 | ||||||
WBPaper00035664 | ||||||
WBPaper00037855 | ||||||
WBPaper00039808 | ||||||
WBPaper00039813 | ||||||
WBPaper00054944 | ||||||
WBPaper00066207 | ||||||
Method | Gene |