WormBase Tree Display for Gene: WBGene00003262
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WBGene00003262 | Evidence | Paper_evidence | WBPaper00004927 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y41G9A | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001265 | |||||
Gene_class | mir | ||||||
Allele | WBVar00145843 | ||||||
WBVar01498623 | |||||||
WBVar01499636 | |||||||
WBVar01130507 | |||||||
WBVar01130508 | |||||||
WBVar00090815 | |||||||
Strain (18) | |||||||
In_cluster | MIR-34 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (12) | |||||||
Structured_description | Concise_description | mir-34 encodes a microRNA, a small non-protein coding RNA; miR-34 expression increases during adulthood, and loss of mir-34 activity results in increased adult lifespan along with increased resistance to heat and oxidative stress; in regulating adult lifespan, mir-34 functions via negative regulation of autophagy; mir-34 is conserved in C. briggsae as well as in Drosophila and humans. | Paper_evidence | WBPaper00004927 | |||
WBPaper00006373 | |||||||
WBPaper00010162 | |||||||
WBPaper00040404 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson324 | |||||||
Date_last_updated | 15 Nov 2011 00:00:00 | ||||||
Automated_description | Involved in several processes, including determination of adult lifespan; negative regulation of autophagy; and response to heat. Expressed in excretory canal; hypodermis; neurons; somatic nervous system; and vulval precursor cell. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_transcript | Y41G9A.7 | |||||
Y41G9A.7a | |||||||
Y41G9A.7b | |||||||
Associated_feature | WBsf979142 | ||||||
WBsf1004490 | |||||||
WBsf1004491 | |||||||
WBsf1022548 | |||||||
WBsf1022549 | |||||||
Experimental_info | Expr_pattern | Expr1666 | |||||
Expr2516 | |||||||
Expr10884 | |||||||
Expr13455 | |||||||
Expr13538 | |||||||
Drives_construct | WBCnstr00020637 | ||||||
Construct_product | WBCnstr00020635 | ||||||
WBCnstr00020636 | |||||||
WBCnstr00020637 | |||||||
WBCnstr00020643 | |||||||
WBCnstr00020644 | |||||||
Regulate_expr_cluster | WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C | ||||||
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C | |||||||
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C | |||||||
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C | |||||||
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C | |||||||
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_adult_20C | |||||||
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_adult_25C | |||||||
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C | |||||||
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C | |||||||
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C | |||||||
Expression_cluster (34) | |||||||
Interaction (11) | |||||||
Map_info | Map | X | Position | -12.6678 | Error | 0.001309 | |
Positive | Positive_clone | Y41G9A | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 5597 | |||||
Pseudo_map_position | |||||||
Reference (25) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |