WormBase Tree Display for Gene: WBGene00002992
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WBGene00002992 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | lin | ||||||
Reference_allele | WBVar00143992 | ||||||
Allele (126) | |||||||
Legacy_information (3) | |||||||
Strain (13) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (32) | |||||||
Ortholog (21) | |||||||
Structured_description | Concise_description | lin-3 encodes a member of the EGF family of peptide growth factors that affects induction of vulval development, viability, ovulation, behavioral quiescence after stress, and male spicule development; it acts genetically upstream of its presumptive receptor let-23, and is expressed in multiple locations consistent with it acting as a localized ligand; for example, the anchor cell of the developing gonad, which induces vulval development. | Paper_evidence | WBPaper00000496 | |||
WBPaper00001573 | |||||||
WBPaper00045813 | |||||||
WBPaper00002043 | |||||||
Person_evidence | WBPerson625 | ||||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson567 | |||||||
Date_last_updated | 13 Jul 2015 00:00:00 | ||||||
Automated_description | Enables receptor ligand activity. Involved in several processes, including positive regulation of ovulation; positive regulation of vulval development; and reproductive process. Located in plasma membrane. Expressed in several structures, including excretory canal; germ line; hermaphrodite gonad; rectal epithelial cell; and vulF. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F36H1.4a | |||||
F36H1.4b | |||||||
F36H1.4c | |||||||
F36H1.4d | |||||||
F36H1.4e | |||||||
F36H1.4f | |||||||
F36H1.4g | |||||||
F36H1.4h | |||||||
Corresponding_CDS_history | F36H1.4:wp52 | ||||||
Corresponding_transcript (11) | |||||||
Other_sequence | CR09820 | ||||||
CRC07071_1 | |||||||
CJC02266_1 | |||||||
Associated_feature (12) | |||||||
Experimental_info | RNAi_result (54) | ||||||
Expr_pattern (16) | |||||||
Drives_construct (19) | |||||||
Construct_product (27) | |||||||
Microarray_results (44) | |||||||
Expression_cluster (158) | |||||||
Interaction (299) | |||||||
WBProcess | WBbiopr:00000020 | ||||||
WBbiopr:00000044 | |||||||
WBbiopr:00000067 | |||||||
WBbiopr:00000070 | |||||||
WBbiopr:00000071 | |||||||
Map_info | Map | IV | Position | 4.82027 | Error | 0.004649 | |
Well_ordered | |||||||
Positive | Positive_clone | F36H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
PS#001 | |||||||
Mapping_data | 2_point | 3296 | |||||
Multi_point | 117 | ||||||
382 | |||||||
383 | |||||||
603 | |||||||
678 | |||||||
774 | |||||||
1135 | |||||||
1137 | |||||||
1276 | |||||||
1640 | |||||||
Pos_neg_data (16) | |||||||
Reference (361) | |||||||
Remark | Updated sequence connections to take account of splice variants. [02/03/28 krb] | ||||||
Method | Gene |