WormBase Tree Display for Gene: WBGene00002207
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WBGene00002207 | SMap | S_parent | Sequence | B0302 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | sid-3 | Paper_evidence | WBPaper00041467 | |||
Sequence_name | B0302.1 | ||||||
Molecular_name | B0302.1a | ||||||
B0302.1a.1 | |||||||
CE33506 | |||||||
B0302.1b | |||||||
CE33548 | |||||||
B0302.1b.1 | |||||||
B0302.1c | |||||||
Other_name | kin-25 | ||||||
CELE_B0302.1 | Accession_evidence | NDB | BX284606 | ||||
Public_name | sid-3 | ||||||
DB_info | Database (13) | ||||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | sid | ||||||
Allele (122) | |||||||
Strain | WBStrain00036067 | ||||||
WBStrain00055665 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (23) | |||||||
Ortholog (45) | |||||||
Paralog (44) | |||||||
Structured_description | Concise_description | sid-3 encodes a nonreceptor tyrosine kinase that is a member of the activated cdc-42-associated kinase (Ack) subfamily of cytoplasmic tyrosine kinases; in C. elegans sid-3 functions to regulate the import of dsRNA into cells, thus affecting the efficiency of RNA-mediated gene silencing (RNAi); SID-3 localizes to the cytoplasm. | Paper_evidence | WBPaper00004273 | |||
WBPaper00041467 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson567 | |||||||
Date_last_updated | 02 Nov 2012 00:00:00 | ||||||
Automated_description | Predicted to enable non-membrane spanning protein tyrosine kinase activity and signaling receptor binding activity. Involved in regulatory ncRNA-mediated post-transcriptional gene silencing. Located in cytoplasm. Expressed in several structures, including excretory canal; intestine; phasmid neurons; rectal gland cell; and somatic cell. Is an ortholog of human TNK2 (tyrosine kinase non receptor 2). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | B0302.1a | |||||
B0302.1b | |||||||
Corresponding_CDS_history | B0302.1a:wp95 | ||||||
B0302.1b:wp95 | |||||||
B0302.1c:wp252 | |||||||
Corresponding_transcript | B0302.1c | ||||||
B0302.1a.1 | |||||||
B0302.1b.1 | |||||||
Other_sequence | Dviv_isotig25152 | ||||||
HBC15010_1 | |||||||
Oden_isotig27081 | |||||||
ES739658.1 | |||||||
Oden_isotig22740 | |||||||
JI164636.1 | |||||||
FG619935.1 | |||||||
CJC00290_1 | |||||||
Associated_feature | WBsf648870 | ||||||
WBsf1008825 | |||||||
WBsf1008826 | |||||||
WBsf1008827 | |||||||
WBsf1024967 | |||||||
WBsf1024968 | |||||||
Experimental_info (8) | |||||||
Map_info | Map | X | Position | 24.0852 | Error | 0.001211 | |
Positive | Positive_clone | B0302 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 4685 | |||||
5259 | |||||||
Pseudo_map_position | |||||||
Reference (29) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |