WormBase Tree Display for Gene: WBGene00002055
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WBGene00002055 | SMap | S_parent | Sequence | F37B4 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ifc | ||||||
Allele (60) | |||||||
Strain | WBStrain00032410 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (12) | |||||||
Ortholog (49) | |||||||
Paralog (12) | |||||||
Structured_description | Concise_description | ifc-1 encodes a nonessential intermediate filament protein; IFC-1 is predicted to function as a structural component of the cytoskeleton; IFC-1 has no function in RNAi assays. | Paper_evidence | WBPaper00001981 | |||
WBPaper00004761 | |||||||
WBPaper00005654 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to be a structural constituent of cytoskeleton. Predicted to be involved in cellular localization; heterochromatin formation; and nucleus organization. Predicted to be located in nuclear envelope and nuclear lamina. Expressed in hypodermis; intestine; and pharynx. Human ortholog(s) of this gene implicated in several diseases, including Dowling-Degos disease; ichthyosis (multiple); and palmoplantar keratosis (multiple). Is an ortholog of several human genes including KRT1 (keratin 1); KRT2 (keratin 2); and KRT3 (keratin 3). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Potential_model (14) | ||||||
Molecular_info | Corresponding_CDS | F37B4.2 | |||||
Corresponding_transcript | F37B4.2.1 | ||||||
Other_sequence | CJC06704_1 | ||||||
CBC04609_1 | |||||||
CBC08053_1 | |||||||
CBC01028_1 | |||||||
Associated_feature (4) | |||||||
Experimental_info | RNAi_result | WBRNAi00007220 | Inferred_automatically | RNAi_primary | |||
WBRNAi00014485 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00046594 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00097123 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062649 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00062650 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00098345 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr3398 | ||||||
Expr15263 | |||||||
Expr1025855 | |||||||
Expr1031208 | |||||||
Expr1150478 | |||||||
Expr2012681 | |||||||
Expr2030917 | |||||||
Drives_construct | WBCnstr00011377 | ||||||
WBCnstr00036489 | |||||||
WBCnstr00042144 | |||||||
Construct_product | WBCnstr00011377 | ||||||
WBCnstr00036489 | |||||||
WBCnstr00042144 | |||||||
Antibody | WBAntibody00000796 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (267) | |||||||
Interaction (77) | |||||||
Map_info | Map | V | Position | -12.8753 | Error | 0.001266 | |
Positive | Positive_clone | F37B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (13) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |