WormBase Tree Display for Gene: WBGene00002017
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WBGene00002017 | SMap | S_parent | Sequence | T27E4 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | hsp | ||||||
Allele | WBVar01499903 | ||||||
WBVar01500129 | |||||||
WBVar01499419 | |||||||
WBVar01499420 | |||||||
WBVar01499056 | |||||||
WBVar01499249 | |||||||
WBVar00250229 | |||||||
WBVar01499316 | |||||||
In_cluster | HSP16A | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (3) | |||||||
Ortholog (93) | |||||||
Paralog (17) | |||||||
Structured_description | Concise_description | hsp-16.11 encodes a 16-kD heat shock protein (HSP) that is a member of the hsp16/hsp20/alphaB-crystallin (HSP16) family of heat shock proteins, and that is identical to the protein encoded by hsp-16.1; hsp-16.11 expression is induced in response to heat shock or other environmental stresses; HSP-16.11 is likely to function as passive ligand temporarily preventing unfolded proteins from aggregating; HSP-16.11 has been shown to interact with intracellular human beta amyloid peptide, a primary component of the extracellular plaques found in Alzheimer's disease. | Paper_evidence | WBPaper00002665 | |||
WBPaper00004424 | |||||||
WBPaper00005371 | |||||||
WBPaper00013029 | |||||||
WBPaper00013239 | |||||||
WBPaper00013280 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable unfolded protein binding activity. Involved in endoplasmic reticulum unfolded protein response. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T27E4.2 | |||||
Corresponding_transcript | T27E4.2.1 | ||||||
Other_sequence (30) | |||||||
Associated_feature | WBsf232206 | ||||||
WBsf232207 | |||||||
Experimental_info | RNAi_result (18) | ||||||
Expr_pattern | Expr1024602 | ||||||
Expr1157856 | |||||||
Expr2012616 | |||||||
Expr2030852 | |||||||
Drives_construct | WBCnstr00036519 | ||||||
Construct_product | WBCnstr00036519 | ||||||
Antibody | WBAntibody00001859 | ||||||
Microarray_results | SMD_T27E4.2 | ||||||
Expression_cluster (208) | |||||||
Interaction (24) | |||||||
Map_info | Map | V | Position | 1.93302 | Error | 0.00282 | |
Positive | Positive_clone | T27E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (51) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |