WormBase Tree Display for Gene: WBGene00002006
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| WBGene00002006 | SMap | S_parent | Sequence | K09C4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | hsp-2 | Person_evidence | WBPerson36 | |||||
| Sequence_name | K09C4.3 | ||||||||
| Molecular_name | K09C4.3 | ||||||||
| Other_name | hsp-2ps | ||||||||
| CELE_K09C4.3 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | hsp-2 | ||||||||
| DB_info | Database | AceView | gene | XD911 | |||||
| WormQTL | gene | WBGene00002006 | |||||||
| NDB | locus_tag | CELE_K09C4.3 | |||||||
| NCBI | gene | 13219875 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0000336 | |||||||
| Gene_class | hsp | ||||||||
| Allele (18) | |||||||||
| Legacy_information | [C.elegansII] NMK. Pseudogene derived from hsp-1. [Heschl and Baillie 1990; BC] | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Paralog | WBGene00002005 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
| Structured_description | Automated_description | Enriched in germ line based on proteomic studies. Is affected by several genes including daf-16; lin-4; and eat-2 based on proteomic; microarray; and RNA-seq studies. Is affected by seven chemicals including metformin; allantoin; and Sirolimus based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS_history | K09C4.3:wp108 | |||||||
| K09C4.3:wp115 | |||||||||
| K09C4.3:wp121 | |||||||||
| Corresponding_pseudogene | K09C4.3 | ||||||||
| Other_sequence | TCC00900_1 | ||||||||
| TX00521 | |||||||||
| Associated_feature | WBsf655146 | ||||||||
| Experimental_info | Microarray_results | SMD_K09C4.3 | |||||||
| 187922_at | |||||||||
| A_12_P147890 | |||||||||
| Aff_K09C4.3 | |||||||||
| Expression_cluster (32) | |||||||||
| Interaction | WBInteraction000524161 | ||||||||
| WBInteraction000524168 | |||||||||
| WBInteraction000543345 | |||||||||
| Map_info | Map | X | Position | -10.5535 | |||||
| Positive | Positive_clone | K09C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| LCES166 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00001136 | ||||||||
| WBPaper00001159 | |||||||||
| WBPaper00001320 | |||||||||
| WBPaper00005475 | |||||||||
| WBPaper00015440 | |||||||||
| WBPaper00022866 | |||||||||
| Remark | This gene was intially designated a pseudogene, but was then changed to be a regular coding gene. This second assignment was in error and this gene is now a pseudogene once more. [040326 krb] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
