WormBase Tree Display for Gene: WBGene00001998
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WBGene00001998 | SMap | S_parent | Sequence | F32A11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 2N444 | |||||
WormQTL | gene | WBGene00001998 | |||||||
WormFlux | gene | WBGene00001998 | |||||||
NDB | locus_tag | CELE_F32A11.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001998|UniProtKB=G5EGG2 | |||||||
family | PTHR12172 | ||||||||
NCBI | gene | 174958 | |||||||
RefSeq | protein | NM_064392.7 | |||||||
TrEMBL | UniProtAcc | G5EGG2 | |||||||
UniProt_GCRP | UniProtAcc | G5EGG2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | hpr | ||||||||
Allele (124) | |||||||||
Strain | WBStrain00040708 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (12) | |||||||||
Ortholog (36) | |||||||||
Structured_description | Concise_description | hpr-17 encodes the C. elegans homolog of the S. pombe Rad17p and S. cerevisiae Rad24p DNA repair and cell cycle checkpoint proteins. | Paper_evidence | WBPaper00003353 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 14 Jun 2011 00:00:00 | ||||||||
Automated_description | Predicted to enable chromatin binding activity. Predicted to contribute to DNA clamp loader activity. Predicted to be involved in DNA damage checkpoint signaling; DNA repair; and mitotic DNA replication checkpoint signaling. Predicted to be located in nucleus. Is an ortholog of human RAD17 (RAD17 checkpoint clamp loader component). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00077189 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00068168 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00064103 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00046067 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00014188 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00027844 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00111951 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1012118 | ||||||||
Expr1031163 | |||||||||
Expr1149959 | |||||||||
Expr2012587 | |||||||||
Expr2030823 | |||||||||
Drives_construct | WBCnstr00036530 | ||||||||
Construct_product | WBCnstr00036530 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (134) | |||||||||
Interaction (32) | |||||||||
Map_info | Map | II | Position | 14.5882 | Error | 0.083821 | |||
Positive | Positive_clone | F32A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4980 | |||||||
4770 | |||||||||
5032 | |||||||||
5728 | |||||||||
Pseudo_map_position | |||||||||
Reference (12) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |