WormBase Tree Display for Gene: WBGene00001892
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WBGene00001892 | SMap | S_parent | Sequence | K06C4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | his-18 | Person_evidence | WBPerson160 | |||||
Sequence_name | K06C4.10 | ||||||||
Molecular_name | K06C4.10 | ||||||||
K06C4.10.1 | |||||||||
CE03252 | |||||||||
Other_name | CELE_K06C4.10 | Accession_evidence | NDB | BX284605 | |||||
Public_name | his-18 | ||||||||
DB_info | Database | AceView | gene | 5J377 | |||||
WormQTL | gene | WBGene00001892 | |||||||
WormFlux | gene | WBGene00001892 | |||||||
NDB | locus_tag | CELE_K06C4.10 | |||||||
NCBI | gene | 179267 | |||||||
RefSeq | protein | NM_072897.6 | |||||||
SwissProt | UniProtAcc | P62784 | |||||||
UniProt_GCRP | UniProtAcc | P62784 | |||||||
OMIM | gene | 602826 | |||||||
602827 | |||||||||
602830 | |||||||||
602833 | |||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | his | ||||||||
Allele | WBVar01499903 | ||||||||
WBVar01500129 | |||||||||
WBVar01499419 | |||||||||
WBVar01499420 | |||||||||
WBVar01499056 | |||||||||
WBVar01741658 | |||||||||
WBVar01033286 | |||||||||
WBVar01033287 | |||||||||
WBVar01033288 | |||||||||
WBVar01499316 | |||||||||
Legacy_information | [C.elegansII] NMK. Histone type H4. HIS4 cluster. [EM] | ||||||||
In_cluster | HIS4_cluster | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00109594 | ||||||||
00109595 | |||||||||
00109596 | |||||||||
Ortholog (90) | |||||||||
Paralog (15) | |||||||||
Structured_description | Concise_description | his-18 encodes an H4 histone; by homology, HIS-18 is predicted to function as a nucleosome component required for packaging of DNA into chromatin; his-18 is a replication-dependent histone locus that resides in the HIS4 cluster on chromosome V. | Paper_evidence | WBPaper00005142 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
WBPerson567 | |||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable DNA binding activity and protein heterodimerization activity. Predicted to be a structural constituent of chromatin. Is an ortholog of several human genes including H4C1 (H4 clustered histone 1); H4C4 (H4 clustered histone 4); and H4C9 (H4 clustered histone 9). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | EFO:MONDO:0031400 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:4785,HGNC:4787,HGNC:4790,HGNC:4793) | ||||
Molecular_info | Corresponding_CDS | K06C4.10 | |||||||
Corresponding_transcript | K06C4.10.1 | ||||||||
Other_sequence (29) | |||||||||
Associated_feature | WBsf647026 | ||||||||
WBsf661509 | |||||||||
Experimental_info | RNAi_result (12) | ||||||||
Expr_pattern | Expr1031111 | ||||||||
Expr1153750 | |||||||||
Expr2012441 | |||||||||
Expr2030677 | |||||||||
Drives_construct | WBCnstr00036621 | ||||||||
Construct_product | WBCnstr00036621 | ||||||||
Microarray_results | A_12_P100994 | ||||||||
GPL19516_CGZ0028037 | |||||||||
GPL21109_K06C4.10 | |||||||||
GPL8673_K06C4_10P00233 | |||||||||
Expression_cluster (112) | |||||||||
Interaction (247) | |||||||||
Map_info | Map | V | Position | 1.67653 | Error | 0.023628 | |||
Positive | Positive_clone | K06C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00005142 | ||||||||
WBPaper00005182 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00040135 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |