WormBase Tree Display for Gene: WBGene00001841
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WBGene00001841 | Evidence | CGC_data_submission | |||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C36B7 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | hen-1 | Person_evidence | WBPerson309 | |||||
Sequence_name | C36B7.7 | ||||||||
Molecular_name (3) | |||||||||
Other_name | CELE_C36B7.7 | Accession_evidence | NDB | BX284606 | |||||
Public_name | hen-1 | ||||||||
DB_info | Database (10) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | hen | ||||||||
Allele (200) | |||||||||
Strain | WBStrain00022193 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (11) | |||||||||
Ortholog (11) | |||||||||
Paralog | WBGene00020505 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | hen-1 encodes a secreted protein that contains a low-density lipoprotein (LDL) receptor motif A; HEN-1 activity is required for integration of sensory stimuli and behavioral plasticity; a hen-1::GFP reporter is expressed in pharyngeal muscles, the vulva, and weakly in a subset of neurons; antibodies to HEN-1 protein detect expression exclusively in the AIY and ASE neurons, where HEN-1 appears to localize to cell bodies and in a punctate pattern in nerve ring axons at sites of synapse formation; HEN-1 expression in AIY appears to be under the control of the TTX-3 LIM domain transcription factor. | Paper_evidence | WBPaper00004727 | |||||
WBPaper00005300 | |||||||||
Curator_confirmed | WBPerson48 | ||||||||
WBPerson1843 | |||||||||
Date_last_updated | 06 Nov 2007 00:00:00 | ||||||||
Automated_description | Predicted to enable transmembrane receptor protein tyrosine kinase activator activity. Involved in dauer larval development and nervous system process. Located in axon and neuronal cell body. Expressed in neurons; pharyngeal muscle cell; and vulva. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C36B7.7 | |||||||
Corresponding_transcript | C36B7.7.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00042048 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011685 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029605 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1911 | ||||||||
Expr1912 | |||||||||
Expr4411 | |||||||||
Expr1017068 | |||||||||
Expr1146048 | |||||||||
Expr2012397 | |||||||||
Expr2030633 | |||||||||
Marker48 | |||||||||
Drives_construct | WBCnstr00004840 | ||||||||
WBCnstr00010515 | |||||||||
WBCnstr00011976 | |||||||||
WBCnstr00036653 | |||||||||
Construct_product | WBCnstr00036653 | ||||||||
Antibody | WBAntibody00000523 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (165) | |||||||||
Interaction (24) | |||||||||
Anatomy_function | WBbtf0093 | ||||||||
WBbtf0094 | |||||||||
WBbtf0095 | |||||||||
WBbtf0096 | |||||||||
WBbtf0097 | |||||||||
WBbtf0098 | |||||||||
WBbtf0099 | |||||||||
WBbtf0100 | |||||||||
Map_info | Map | X | Position | -1.85356 | Error | 0.009919 | |||
Positive | Positive_clone | C36B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4400 | |||||||
Pseudo_map_position | |||||||||
Reference (47) | |||||||||
Remark | Sequence connection from [Katsura I] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |