WormBase Tree Display for Gene: WBGene00001715
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WBGene00001715 | Evidence | Paper_evidence | WBPaper00003717 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | K10C2 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | grl | ||||||
Allele (27) | |||||||
Strain | WBStrain00032691 | ||||||
RNASeq_FPKM (74) | |||||||
Ortholog (17) | |||||||
Paralog (32) | |||||||
Structured_description | Concise_description | grl-6 encodes a hedgehog-like protein, with an N-terminal signalsequence, a central proline-rich low-complexity region, and a C-terminalGround-like (Grl) domain; GRL-6 is expressed in larval intestine, amphidsocket cells, and neurons; the Grl domain is predicted to form acysteine-crosslinked protein involved in intercellular signalling, andit has subtle similarity to the N-terminal Hedge domain of HEDGEHOGproteins. | Paper_evidence | WBPaper00003717 | |||
WBPaper00006525 | |||||||
WBPaper00026841 | |||||||
WBPaper00027263 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 05 Nov 2006 00:00:00 | ||||||
Automated_description | Expressed in PVT. Is predicted to encode a protein with the following domain: Ground-like domain. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | K10C2.5 | |||||
Corresponding_transcript | K10C2.5.1 | ||||||
Other_sequence | CSC01471_1 | ||||||
FD516716.1 | |||||||
AS14466 | |||||||
FC811116.1 | |||||||
MC00143 | |||||||
Associated_feature | WBsf654069 | ||||||
WBsf670630 | |||||||
Experimental_info | RNAi_result | WBRNAi00050495 | Inferred_automatically | RNAi_primary | |||
WBRNAi00016961 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034239 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr4445 | ||||||
Expr6380 | |||||||
Expr1019060 | |||||||
Expr1154205 | |||||||
Expr2012271 | |||||||
Expr2030507 | |||||||
Drives_construct | WBCnstr00003018 | ||||||
WBCnstr00012009 | |||||||
WBCnstr00036745 | |||||||
Construct_product | WBCnstr00036745 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (92) | |||||||
Interaction | WBInteraction000305397 | ||||||
WBInteraction000378475 | |||||||
WBInteraction000451390 | |||||||
WBInteraction000562802 | |||||||
Map_info | Map | X | Position | -2.90361 | Error | 0.002849 | |
Positive | Positive_clone | K10C2 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00003717 | ||||||
WBPaper00028754 | |||||||
WBPaper00031588 | |||||||
WBPaper00063946 | |||||||
WBPaper00064105 | |||||||
Remark | ground-like gene, contains ground-like domain, hedgehog-related | Paper_evidence | WBPaper00003717 | ||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |