WormBase Tree Display for Gene: WBGene00001695
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| WBGene00001695 | Evidence | Paper_evidence | WBPaper00003717 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F07C3 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | grd-6 | Person_evidence | WBPerson83 | |||||
| Sequence_name | T18H9.1 | ||||||||
| Molecular_name (18) | |||||||||
| Other_name | CELE_T18H9.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | grd-6 | ||||||||
| DB_info | Database | AceView | gene | 5J705 | |||||
| WormQTL | gene | WBGene00001695 | |||||||
| NDB | locus_tag | CELE_T18H9.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001695|UniProtKB=A0A3P6MY87 | |||||||
| family | PTHR31967 | ||||||||
| NCBI | gene | 24104900 | |||||||
| RefSeq | protein | NM_001368462.3 | |||||||
| NM_001368464.3 | |||||||||
| NM_001368461.2 | |||||||||
| NM_001368463.3 | |||||||||
| NM_001368465.2 | |||||||||
| NM_001307786.2 | |||||||||
| TrEMBL | UniProtAcc | Q22551 | |||||||
| A0A3P6PCU5 | |||||||||
| A0A3P6NID2 | |||||||||
| A0A3P6MY87 | |||||||||
| A0A3P6N6I4 | |||||||||
| A0A3P6N661 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A3P6MY87 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | grd | ||||||||
| Allele (33) | |||||||||
| Strain | WBStrain00032756 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Paralog (26) | |||||||||
| Structured_description | Concise_description | grd-6 encodes a hedgehog-like protein, with an N-terminal signalsequence, a central low-complexity proline-rich domain, and a C-terminalGround domain; GRD-6 is expressed in hypodermis and in various neurons,in both head and tail, and the PVT interneuron; the Ground domain ispredicted to form a cysteine-crosslinked protein involved inintercellular signalling, and it has subtle similarity to the N-terminalHedge domain of HEDGEHOG proteins; GRD-6 has no obvious function in RNAiassays. | Paper_evidence | WBPaper00003717 | |||||
| WBPaper00006525 | |||||||||
| WBPaper00026841 | |||||||||
| WBPaper00027263 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 05 Nov 2006 00:00:00 | ||||||||
| Automated_description | Expressed in excretory duct and excretory pore. Is predicted to encode a protein with the following domain: Ground-like domain. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T18H9.1a | |||||||
| T18H9.1b | |||||||||
| T18H9.1c | |||||||||
| T18H9.1d | |||||||||
| T18H9.1f | |||||||||
| T18H9.1g | |||||||||
| Corresponding_CDS_history | T18H9.1:wp109 | ||||||||
| T18H9.1e:wp269 | |||||||||
| Corresponding_transcript | T18H9.1a.1 | ||||||||
| T18H9.1b.1 | |||||||||
| T18H9.1c.1 | |||||||||
| T18H9.1d.1 | |||||||||
| T18H9.1f.1 | |||||||||
| T18H9.1g.1 | |||||||||
| Other_sequence | CBC02453_1 | ||||||||
| CR04442 | |||||||||
| CRC05002_1 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00076995 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018806 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053473 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr637 | ||||||||
| Expr4432 | |||||||||
| Expr6706 | |||||||||
| Expr1018501 | |||||||||
| Expr1031012 | |||||||||
| Expr1157038 | |||||||||
| Expr2012236 | |||||||||
| Expr2030472 | |||||||||
| Drives_construct | WBCnstr00003876 | ||||||||
| WBCnstr00011995 | |||||||||
| WBCnstr00012461 | |||||||||
| WBCnstr00036761 | |||||||||
| Construct_product | WBCnstr00036761 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (251) | |||||||||
| Interaction (22) | |||||||||
| WBProcess | WBbiopr:00000123 | ||||||||
| Map_info | Map | V | Position | 1.95295 | Error | 0.000514 | |||
| Positive | Positive_clone | T18H9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002823 | ||||||||
| WBPaper00003717 | |||||||||
| WBPaper00024393 | |||||||||
| WBPaper00026841 | |||||||||
| WBPaper00028754 | |||||||||
| WBPaper00031588 | |||||||||
| WBPaper00064105 | |||||||||
| Remark | yk68a8 removed from sequence list. sdm 11.00 | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
