WormBase Tree Display for Gene: WBGene00001589
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| WBGene00001589 | SMap | S_parent | Sequence | H04J21 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | gip-1 | Person_evidence | WBPerson283 | |||||
| Sequence_name | H04J21.3 | ||||||||
| Molecular_name | H04J21.3a | ||||||||
| H04J21.3a.1 | |||||||||
| CE31849 | |||||||||
| H04J21.3b | |||||||||
| CE32450 | |||||||||
| H04J21.3b.1 | |||||||||
| Other_name | CeGrip | ||||||||
| CELE_H04J21.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | gip-1 | ||||||||
| DB_info | Database | AceView | gene | 3D451 | |||||
| WormQTL | gene | WBGene00001589 | |||||||
| WormFlux | gene | WBGene00001589 | |||||||
| NDB | locus_tag | CELE_H04J21.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001589|UniProtKB=Q8ITY3 | |||||||
| family | PTHR19302 | ||||||||
| NCBI | gene | 175355 | |||||||
| RefSeq | protein | NM_065139.8 | |||||||
| NM_001027461.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF343545 | |||||||
| TrEMBL | UniProtAcc | Q8ITY3 | |||||||
| O61208 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8ITY3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gip | ||||||||
| Allele (518) | |||||||||
| Possibly_affected_by | WBVar02152823 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Contained_in_operon | CEOP3075 | ||||||||
| Ortholog (24) | |||||||||
| Structured_description | Concise_description | gip-1 encodes the C. elegans homolog of Saccharomyces cerevisiae Spc98p, a gamma-tubulin-binding protein that with Spc97p forms part of a gamma-tubulin ring complex that can nucleate microtubule formation in vitro and in vivo; in C. elegans, GIP-1 is essential for embryogenesis and required for formation of centrosomal asters during interphase and formation of the mitotic spindle, but not for formation of mitotic asters; GIP-1 colocalizes with TBG-1/gamma-tubulin to centrosomes during interphase and mitosis; GIP-1 and TBG-1 are required reciprocally for centrosomal localization. | Paper_evidence | WBPaper00005041 | |||||
| WBPaper00005320 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable gamma-tubulin binding activity. Predicted to contribute to microtubule minus-end binding activity. Predicted to be involved in meiotic cell cycle; microtubule cytoskeleton organization; and mitotic cell cycle. Predicted to be located in centrosome and equatorial microtubule organizing center. Predicted to be part of gamma-tubulin complex. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H04J21.3a | |||||||
| H04J21.3b | |||||||||
| Corresponding_CDS_history | H04J21.3:wp85 | ||||||||
| H04J21.3c:wp275 | |||||||||
| Corresponding_transcript | H04J21.3a.1 | ||||||||
| H04J21.3b.1 | |||||||||
| Other_sequence | DA05557 | ||||||||
| MH08036 | |||||||||
| CRC00484_1 | |||||||||
| CR07642 | |||||||||
| CR04662 | |||||||||
| MH02504 | |||||||||
| CRC10427_1 | |||||||||
| CR01392 | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr4389 | ||||||||
| Expr11896 | |||||||||
| Expr14751 | |||||||||
| Expr1020358 | |||||||||
| Expr1030952 | |||||||||
| Expr1153030 | |||||||||
| Expr2012038 | |||||||||
| Expr2030274 | |||||||||
| Antibody | WBAntibody00000442 | ||||||||
| WBAntibody00002961 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (71) | |||||||||
| Interaction (61) | |||||||||
| Map_info | Map | III | Position | -14.7152 | Error | 0.010725 | |||
| Positive | Positive_clone | H04J21 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (14) | |||||||||
| Remark | Sequence connection from [Hannak E], 02/06/11 krb. | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
