WormBase Tree Display for Gene: WBGene00001517
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WBGene00001517 | SMap | S_parent | Sequence | C15B12 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gar | ||||||
Allele (74) | |||||||
Strain | WBStrain00031608 | ||||||
WBStrain00035854 | |||||||
WBStrain00022221 | |||||||
WBStrain00022222 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (26) | |||||||
Ortholog (31) | |||||||
Paralog (20) | |||||||
Structured_description | Concise_description | gar-1 encodes a G protein-linked muscarinic acetylcholine receptor; though gar-1 is most closely related to muscarinic acetylcholine receptors (mAChR), it is pharmacologically distinct from them in its response to certain ligands; gar-1 gene transcripts are expressed at all developmental stages; the GAR-1-GFP fusion protein is expressed in some head neurons and in the PVM neuron; electrophysiological studies indicate that gar-1 couples to the inhibitory subunit of G proteins and not to Gs or to Go/Gq. | Paper_evidence | WBPaper00003318 | |||
WBPaper00003934 | |||||||
WBPaper00004388 | |||||||
WBPaper00005000 | |||||||
Curator_confirmed | WBPerson324 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enables G protein-coupled acetylcholine receptor activity. Involved in cholinergic synaptic transmission. Located in postsynaptic membrane. Expressed in PVM and head neurons. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C15B12.5a | |||||
C15B12.5b | |||||||
C15B12.5c | |||||||
C15B12.5d | |||||||
C15B12.5e | |||||||
Corresponding_transcript | C15B12.5a.1 | ||||||
C15B12.5b.1 | |||||||
C15B12.5c.1 | |||||||
C15B12.5d.1 | |||||||
C15B12.5e.1 | |||||||
Other_sequence | JI172500.1 | ||||||
ASC02740_1 | |||||||
JI168572.1 | |||||||
MI08383 | |||||||
FJ609744.1 | |||||||
FJ609743.1 | |||||||
Dviv_isotig25020 | |||||||
AS01817 | |||||||
Associated_feature | WBsf1005578 | ||||||
WBsf1005579 | |||||||
WBsf1023102 | |||||||
WBsf1023103 | |||||||
WBsf237489 | |||||||
Experimental_info | RNAi_result | WBRNAi00075430 | Inferred_automatically | RNAi_primary | |||
WBRNAi00010779 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040586 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr981 | ||||||
Expr1115 | |||||||
Expr1011911 | |||||||
Expr1144640 | |||||||
Expr2011944 | |||||||
Expr2030181 | |||||||
Drives_construct | WBCnstr00010086 | ||||||
WBCnstr00036894 | |||||||
Construct_product | WBCnstr00036894 | ||||||
Microarray_results (34) | |||||||
Expression_cluster (146) | |||||||
Interaction (14) | |||||||
Map_info | Map | X | Position | -2.89315 | Error | 0.001766 | |
Positive | Positive_clone | C15B12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (23) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |