WormBase Tree Display for Gene: WBGene00001437

WBGene00001437 SMap: S_parent: Sequence: F26A1
  Identity: Version: 1
    Name: CGC_name: fkh-5 Person_evidence: WBPerson411
      Sequence_name: F26A1.2
      Molecular_name: F26A1.2
        F26A1.2.1
        CE47949
      Other_name: CELE_F26A1.2 Accession_evidence: NDB BX284603
      Public_name: fkh-5
    DB_info: Database: AceView gene 3F935
        WormQTL gene WBGene00001437
        WormFlux gene WBGene00001437
        NDB locus_tag CELE_F26A1.2
        Panther gene CAEEL|WormBase=WBGene00001437|UniProtKB=Q19802
          family PTHR13962
        NCBI gene 184944
        RefSeq protein NM_065602.3
        SwissProt UniProtAcc Q19802
        TREEFAM TREEFAM_ID TF343804
        UniProt_GCRP UniProtAcc Q19802
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:24 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fkh
    Allele (33)
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog (27)
    Paralog: WBGene00001435 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00001436 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
    Structured_description: Concise_description: fkh-5 encodes a member of the forkhead domain transcription factor family; triply mutant animals with reduced activity of fkh-3, fkh-4, and fkh-5 show reduced expression of 21U-RNA transcripts; in vitro, FKH-5 binds a consensus regulatory element found upstream of 21U-RNAs. Paper_evidence: WBPaper00005730
            WBPaper00041348
          Curator_confirmed: WBPerson48
            WBPerson1843
          Date_last_updated: 07 Oct 2014 00:00:00
      Automated_description: Enables RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Expressed in head neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F26A1.2
    Corresponding_transcript: F26A1.2.1
    Associated_feature: WBsf658870
      WBsf978380
      WBsf992229
      WBsf992230
      WBsf1014812
    Transcription_factor: WBTranscriptionFactor000168
  Experimental_info: RNAi_result: WBRNAi00013907 Inferred_automatically: RNAi_primary
      WBRNAi00045575 Inferred_automatically: RNAi_primary
      WBRNAi00031416 Inferred_automatically: RNAi_primary
      WBRNAi00005138 Inferred_automatically: RNAi_primary
      WBRNAi00067276 Inferred_automatically: RNAi_primary
      WBRNAi00067249 Inferred_automatically: RNAi_primary
      WBRNAi00113570 Inferred_automatically: RNAi_primary
      WBRNAi00095106 Inferred_automatically: RNAi_primary
      WBRNAi00095105 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2336
      Expr1028867
      Expr1030862
      Expr1149489
      Expr2011807
      Expr2030045
    Drives_construct: WBCnstr00010772
      WBCnstr00036949
    Construct_product: WBCnstr00036949
    Microarray_results (19)
    Expression_cluster (96)
    Interaction (87)
    WBProcess: WBbiopr:00000025
  Map_info: Map: III Position: -2.42547 Error: 0.002889
    Positive: Positive_clone: F26A1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00005730
    WBPaper00011551
    WBPaper00027307
    WBPaper00027309
    WBPaper00029337
    WBPaper00041348
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene