WormBase Tree Display for Gene: WBGene00001193
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WBGene00001193 | SMap | S_parent | Sequence | C23H3 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | egl | ||||||
Reference_allele | WBVar00089528 | ||||||
Allele (31) | |||||||
Legacy_information | n481 : variable bloating Type A many animals form bag-of-worms (60%); abnormal vulva. ES2 adult. NA1. | ||||||
See also e1952, n481 | |||||||
[C.elegansII] n481 : variable bloating, insensitive to serotonin and imipramine; 60% adults form bag-of-worms; abnormal vulva; suppressor of Tra-3. ES2 adult. ME3. OA1: e1952 (pka egl-48, HME1/2, stronger suppressor of Tra-3). [Trent et al. 1983; Hodgkin 1986; CB; MT] | |||||||
Strain | WBStrain00026509 | ||||||
WBStrain00026781 | |||||||
WBStrain00026856 | |||||||
WBStrain00004534 | |||||||
WBStrain00004636 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (15) | |||||||
Ortholog (27) | |||||||
Structured_description | Concise_description | egl-26 encodes a protein that contains an H-box and an NC domain that is a member of the LRAT (lecithin retinol acyltransferase) subfamily of the NlpC/P60 superfamily of enzymes; egl-26 activity is required for fertility, egg laying, and vulval development, specifically the connection of the uterus to the vulva mediated by proper morphogenesis of vulF, the most dorsal vulval cell; EGL-26 is an apical membrane protein that is expressed in many cells, including vulF, and appears to be expressed near the vulva and uterus only during the L4 larval stage; EGL-26 membrane localization is necessary for its function. | Paper_evidence | WBPaper00000635 | |||
WBPaper00005103 | |||||||
WBPaper00030762 | |||||||
Curator_confirmed | WBPerson48 | ||||||
WBPerson1843 | |||||||
Date_last_updated | 07 Aug 2007 00:00:00 | ||||||
Automated_description | Predicted to enable acyltransferase activity. Involved in several processes, including egg-laying behavior; positive regulation of vulval development; and vulval development. Located in cytoplasmic side of apical plasma membrane. Expressed in several structures, including buccal cavity; excretory canal; hermaphrodite gonad; rectum; and vulval cell. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C23H3.1a | |||||
C23H3.1b | |||||||
Corresponding_transcript | C23H3.1a.1 | ||||||
C23H3.1b.1 | |||||||
Other_sequence | CR12698 | ||||||
CJC02584_1 | |||||||
CGC00868_1 | |||||||
CRC04517_1 | |||||||
Associated_feature | WBsf654854 | ||||||
WBsf717611 | |||||||
WBsf717612 | |||||||
WBsf986311 | |||||||
WBsf986312 | |||||||
Experimental_info | RNAi_result (12) | ||||||
Expr_pattern (11) | |||||||
Drives_construct | WBCnstr00000797 | ||||||
WBCnstr00006433 | |||||||
WBCnstr00010463 | |||||||
WBCnstr00011411 | |||||||
WBCnstr00019607 | |||||||
WBCnstr00022871 | |||||||
WBCnstr00037038 | |||||||
Construct_product | WBCnstr00006433 | ||||||
WBCnstr00010463 | |||||||
WBCnstr00037038 | |||||||
Microarray_results (19) | |||||||
Expression_cluster (102) | |||||||
Interaction (62) | |||||||
Map_info | Map | II | Position | -16.2721 | Error | 0.158173 | |
Positive | Positive_clone | C23H3 | Inferred_automatically (2) | ||||
Mapping_data | 2_point | 797 | |||||
2632 | |||||||
7078 | |||||||
7112 | |||||||
Multi_point | 743 | ||||||
1060 | |||||||
1674 | |||||||
3907 | |||||||
4244 | |||||||
Pos_neg_data | 4724 | ||||||
Reference (25) | |||||||
Remark | Sequence connection from [Hanna-Rose W, Han M] | ||||||
cog-4 added as an other name. krb 04/03/02 | |||||||
Method | Gene |