WormBase Tree Display for Gene: WBGene00001058
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| WBGene00001058 | Evidence | Person_evidence | WBPerson2549 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson6733 | |||||||||
| SMap | S_parent | Sequence | R11E3 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | dpf-5 | |||||||
| Sequence_name | R11E3.8 | ||||||||
| Molecular_name | R11E3.8a | ||||||||
| R11E3.8a.1 | |||||||||
| CE29985 | |||||||||
| R11E3.8b | |||||||||
| CE48612 | |||||||||
| R11E3.8b.1 | |||||||||
| Other_name | CELE_R11E3.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | dpf-5 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dpf | ||||||||
| Allele (63) | |||||||||
| Strain | WBStrain00001648 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00097727 | ||||||||
| 00097728 | |||||||||
| 00097729 | |||||||||
| 00108177 | |||||||||
| 00108178 | |||||||||
| Contained_in_operon | CEOP4152 | ||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00001060 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00001054 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001055 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001056 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001057 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001059 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | dpf-5 encodes a putative acylamino-acid-releasing enzyme (AARE; EC 3.4.19.1), orthologous to human APEH, with no obvious function in mass RNAi assays. | Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 08 Sep 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in cytoplasm. Is an ortholog of human APEH (acylaminoacyl-peptide hydrolase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R11E3.8a | |||||||
| R11E3.8b | |||||||||
| Corresponding_transcript | R11E3.8a.1 | ||||||||
| R11E3.8b.1 | |||||||||
| Other_sequence (59) | |||||||||
| Associated_feature | WBsf034298 | ||||||||
| WBsf230022 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051794 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034862 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017754 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089134 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016207 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram560 | ||||||||
| Expr6507 | |||||||||
| Expr1011406 | |||||||||
| Expr1030668 | |||||||||
| Expr1155455 | |||||||||
| Expr2011043 | |||||||||
| Expr2029280 | |||||||||
| Drives_construct | WBCnstr00002486 | ||||||||
| WBCnstr00037112 | |||||||||
| Construct_product | WBCnstr00037112 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (107) | |||||||||
| Interaction (89) | |||||||||
| Map_info | Map | IV | Position | 1.27585 | Error | 0.004512 | |||
| Positive | Positive_clone | R11E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00019587 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
