WormBase Tree Display for Gene: WBGene00001056
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| WBGene00001056 | Evidence | Person_evidence | WBPerson2549 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson6733 | |||||||||
| SMap | S_parent | Sequence | K02F2 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | dpf-3 | |||||||
| Sequence_name | K02F2.1 | ||||||||
| Molecular_name | K02F2.1a | ||||||||
| K02F2.1a.1 | |||||||||
| CE17153 | |||||||||
| K02F2.1b | |||||||||
| CE28837 | |||||||||
| K02F2.1b.1 | |||||||||
| Other_name | K02F2.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| K02F2.i | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_K02F2.1 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | dpf-3 | ||||||||
| DB_info | Database | AceView | gene | 1H419 | |||||
| WormQTL | gene | WBGene00001056 | |||||||
| WormFlux | gene | WBGene00001056 | |||||||
| NDB | locus_tag | CELE_K02F2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001056|UniProtKB=H2KZK7 | |||||||
| family | PTHR11731 | ||||||||
| NCBI | gene | 172409 | |||||||
| RefSeq | protein | NM_059555.2 | |||||||
| NM_059556.5 | |||||||||
| TrEMBL | UniProtAcc | Q965K3 | |||||||
| H2KZK7 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZK7 | |||||||
| OMIM | gene | 608258 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dpf | ||||||||
| Allele (51) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022369 | ||||||||
| 00022370 | |||||||||
| 00108173 | |||||||||
| 00108174 | |||||||||
| Contained_in_operon | CEOP1999 | ||||||||
| Ortholog (45) | |||||||||
| Paralog | WBGene00001054 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001055 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001057 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001058 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001059 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable dipeptidyl-peptidase activity. Predicted to be involved in proteolysis. Human ortholog(s) of this gene implicated in primary immunodeficiency disease. Is an ortholog of human DPP8 (dipeptidyl peptidase 8) and DPP9 (dipeptidyl peptidase 9). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18648) | ||||
| Molecular_info | Corresponding_CDS | K02F2.1a | |||||||
| K02F2.1b | |||||||||
| Corresponding_transcript | K02F2.1a.1 | ||||||||
| K02F2.1b.1 | |||||||||
| Other_sequence (30) | |||||||||
| Associated_feature | WBsf643404 | ||||||||
| WBsf656448 | |||||||||
| WBsf656449 | |||||||||
| WBsf976760 | |||||||||
| WBsf976761 | |||||||||
| WBsf976762 | |||||||||
| WBsf976763 | |||||||||
| WBsf217906 | |||||||||
| WBsf217907 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00003898 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00116484 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062300 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049733 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089105 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033886 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015335 | ||||||||
| Expr1030666 | |||||||||
| Expr1153455 | |||||||||
| Expr2011041 | |||||||||
| Expr2029278 | |||||||||
| Drives_construct | WBCnstr00037114 | ||||||||
| Construct_product | WBCnstr00037114 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (131) | |||||||||
| SAGE_tag (23) | |||||||||
| Interaction (27) | |||||||||
| Map_info | Map | I | Position | 1.36995 | Error | 0.002958 | |||
| Positive | Positive_clone | K02F2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00010074 | ||||||||
| WBPaper00019587 | |||||||||
| WBPaper00029387 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
