WormBase Tree Display for Gene: WBGene00000995
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| WBGene00000995 | SMap | S_parent | Sequence | C18D1 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | die | ||||||
| Allele (111) | |||||||
| Legacy_information | w34 homozygotes are zygotic embryonic lethal, arrest at two-fold stage. Dorsal hypodermal cells fail to intercalate.Cloned: C18D1.1, encoding zinc finger protein. | ||||||
| Strain | WBStrain00029359 | ||||||
| WBStrain00022735 | |||||||
| WBStrain00022754 | |||||||
| WBStrain00029337 | |||||||
| WBStrain00029384 | |||||||
| WBStrain00029393 | |||||||
| WBStrain00030020 | |||||||
| WBStrain00029959 | |||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation | 00002156 | ||||||
| 00002157 | |||||||
| 00002158 | |||||||
| 00002159 | |||||||
| 00002160 | |||||||
| 00002161 | |||||||
| Ortholog (30) | |||||||
| Paralog | WBGene00007670 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| Structured_description | Concise_description | die-1 encodes a C2H2 zinc finger protein containing four fingers, homologous to CG18265-PA in Drosophila; DIE-1 is autonomously required in the posterior dorsal hypodermis for intercalation, for morphogenesis in other embryonic tissues, and for normal postembryonic growth and vulval development. | Paper_evidence | WBPaper00003324 | |||
| WBPaper00004781 | |||||||
| WBPaper00005654 | |||||||
| Curator_confirmed | WBPerson567 | ||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
| Automated_description | Involved in several processes, including cell fate specification; maintenance of left/right asymmetry; and neuron development involved in amphid sensory organ development. Expressed in several structures, including amphid neurons; intestine; pharynx; somatic nervous system; and tail. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS (2) | ||||||
| Corresponding_CDS_history | C18D1.1:wp252 | ||||||
| Corresponding_transcript | C18D1.1a.1 | ||||||
| C18D1.1b.1 | |||||||
| Other_sequence | JI484136.1 | ||||||
| JI464513.1 | |||||||
| CR04843 | |||||||
| CRC07295_1 | |||||||
| FK802815.1 | |||||||
| JI164714.1 | |||||||
| CBC03316_1 | |||||||
| JI164642.1 | |||||||
| Associated_feature (30) | |||||||
| Transcription_factor | WBTranscriptionFactor000961 | ||||||
| Experimental_info | RNAi_result (42) | ||||||
| Expr_pattern (17) | |||||||
| Drives_construct | WBCnstr00000291 | ||||||
| WBCnstr00001604 | |||||||
| WBCnstr00006655 | |||||||
| WBCnstr00008239 | |||||||
| WBCnstr00012584 | |||||||
| WBCnstr00015216 | |||||||
| WBCnstr00016506 | |||||||
| WBCnstr00018897 | |||||||
| WBCnstr00018909 | |||||||
| WBCnstr00037150 | |||||||
| Construct_product | WBCnstr00006601 | ||||||
| WBCnstr00015373 | |||||||
| WBCnstr00015374 | |||||||
| WBCnstr00018909 | |||||||
| WBCnstr00018910 | |||||||
| WBCnstr00037150 | |||||||
| Antibody | WBAntibody00000388 | ||||||
| Microarray_results (22) | |||||||
| Expression_cluster (201) | |||||||
| Interaction (301) | |||||||
| Anatomy_function | WBbtf0633 | ||||||
| WBbtf0634 | |||||||
| Map_info | Map | II | Position | 1.87318 | Error | 0.003278 | |
| Positive | Inside_rearr | mnDf71 | |||||
| Positive_clone | C18D1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| K10A2 | Person_evidence | WBPerson539 | |||||
| Author_evidence | Hardin JD | ||||||
| Negative | Outside_rearr | mnDf61 | |||||
| mnDf83 | |||||||
| Mapping_data | Pos_neg_data | 10656 | |||||
| 10657 | |||||||
| 10658 | |||||||
| Reference (41) | |||||||
| Remark | [Heid PJ, Hardin J] die-1 = C18D1.1 | ||||||
| Data extracted from Heid et al (2001) by JAH | |||||||
| Method | Gene |
