WormBase Tree Display for Gene: WBGene00000627
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| WBGene00000627 | Evidence | Person_evidence | WBPerson345 | ||||
|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||
| SMap | S_parent | Sequence | T28F2 | ||||
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | col | ||||||
| Allele (31) | |||||||
| RNASeq_FPKM (74) | |||||||
| GO_annotation | 00025256 | ||||||
| 00025257 | |||||||
| 00025258 | |||||||
| 00107633 | |||||||
| Ortholog (25) | |||||||
| Paralog (27) | |||||||
| Structured_description | Concise_description | col-50 encodes a cuticle collagen. | Curator_confirmed | WBPerson1843 | |||
| Date_last_updated | 03 Apr 2007 00:00:00 | ||||||
| Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | T28F2.6 | |||||
| Corresponding_transcript | T28F2.6.1 | ||||||
| T28F2.6.2 | |||||||
| Other_sequence (20) | |||||||
| Associated_feature (5) | |||||||
| Experimental_info | RNAi_result | WBRNAi00036095 | Inferred_automatically | RNAi_primary | |||
| WBRNAi00054430 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00004341 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1021300 | ||||||
| Expr1030370 | |||||||
| Expr1157974 | |||||||
| Expr2010402 | |||||||
| Expr2028644 | |||||||
| Drives_construct | WBCnstr00037417 | ||||||
| Construct_product | WBCnstr00037417 | ||||||
| Microarray_results (19) | |||||||
| Expression_cluster (117) | |||||||
| Interaction | WBInteraction000318147 | ||||||
| WBInteraction000378892 | |||||||
| WBInteraction000401032 | |||||||
| WBInteraction000417258 | |||||||
| WBInteraction000419157 | |||||||
| WBInteraction000434872 | |||||||
| WBInteraction000448009 | |||||||
| WBInteraction000469617 | |||||||
| WBInteraction000472066 | |||||||
| WBInteraction000472666 | |||||||
| Map_info | Map | I | Position | -3.04174 | Error | 0.009173 | |
| Positive | Positive_clone | T28F2 | Inferred_automatically | From CDS info | |||
| From sequence, transcript, pseudogene data | |||||||
| Pseudo_map_position | |||||||
| Reference | WBPaper00038491 | ||||||
| WBPaper00055090 | |||||||
| WBPaper00063926 | |||||||
| WBPaper00064788 | |||||||
| WBPaper00065080 | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
