WormBase Tree Display for Gene: WBGene00000618
expand all nodes | collapse all nodes | view schema
WBGene00000618 | SMap | S_parent | Sequence | T10B10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | col-41 | Person_evidence | WBPerson345 | |||||
Sequence_name | T10B10.1 | ||||||||
Molecular_name | T10B10.1 | ||||||||
T10B10.1.1 | |||||||||
CE06399 | |||||||||
Other_name | CELE_T10B10.1 | Accession_evidence | NDB | BX284606 | |||||
Public_name | col-41 | ||||||||
DB_info | Database | AceView | gene | XP794 | |||||
WormQTL | gene | WBGene00000618 | |||||||
WormFlux | gene | WBGene00000618 | |||||||
NDB | locus_tag | CELE_T10B10.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000618|UniProtKB=Q22369 | |||||||
family | PTHR24637 | ||||||||
NCBI | gene | 181610 | |||||||
RefSeq | protein | NM_078121.5 | |||||||
TREEFAM | TREEFAM_ID | TF319043 | |||||||
TrEMBL | UniProtAcc | Q22369 | |||||||
UniProt_GCRP | UniProtAcc | Q22369 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | col | ||||||||
Allele (32) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00075098 | ||||||||
00075099 | |||||||||
00107627 | |||||||||
Ortholog (35) | |||||||||
Paralog (165) | |||||||||
Structured_description | Concise_description | col-41 encodes a cuticle collagen. | Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 03 Apr 2007 00:00:00 | ||||||||
Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. Expressed in hypodermis and vulval precursor cell. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T10B10.1 | |||||||
Corresponding_transcript | T10B10.1.1 | ||||||||
Other_sequence (31) | |||||||||
Associated_feature | WBsf980898 | ||||||||
WBsf980899 | |||||||||
WBsf980900 | |||||||||
WBsf980901 | |||||||||
WBsf238302 | |||||||||
WBsf238303 | |||||||||
Experimental_info | RNAi_result (11) | ||||||||
Expr_pattern | Expr12255 | ||||||||
Expr13630 | |||||||||
Expr1026401 | |||||||||
Expr1030363 | |||||||||
Expr1156588 | |||||||||
Expr2010394 | |||||||||
Expr2028636 | |||||||||
Drives_construct | WBCnstr00020502 | ||||||||
WBCnstr00037422 | |||||||||
WBCnstr00039890 | |||||||||
Construct_product | WBCnstr00037422 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (230) | |||||||||
Interaction (198) | |||||||||
Map_info | Map | X | Position | 22.2634 | |||||
Positive | Positive_clone | T10B10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (13) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |