WormBase Tree Display for Gene: WBGene00000559

WBGene00000559 Evidence: Person_evidence: WBPerson168
  SMap: S_parent: Sequence: R09B5
  Identity: Version: 1
    Name: CGC_name: cnc-5 Person_evidence: WBPerson168
      Sequence_name: R09B5.10
      Molecular_name: R09B5.10
        R09B5.10.1
        CE12636
      Other_name: CELE_R09B5.10 Accession_evidence: NDB BX284605
      Public_name: cnc-5
    DB_info: Database: AceView gene 5B921
        WormQTL gene WBGene00000559
        WormFlux gene WBGene00000559
        NDB locus_tag CELE_R09B5.10
        NCBI gene 187729
        RefSeq protein NM_071014.1
        TrEMBL UniProtAcc O44614
        UniProt_GCRP UniProtAcc O44614
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cnc
    Allele (14)
    RNASeq_FPKM (74)
    GO_annotation: 00032950
      00032951
    Ortholog: WBGene00045471 Caenorhabditis briggsae Person_evidence: WBPerson168
            WBPerson2531
      WBGene00028820 Caenorhabditis briggsae Person_evidence: WBPerson168
            WBPerson2531
      WBGene00077433 Caenorhabditis remanei From_analysis: OMA
      chrV_pilon.g13220 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: cnc-5 encodes one of eleven C. elegans caenacin peptides; CNC-5 is predicted to be a secreted protein that, based upon similarity to CNC-2, -4, and -6, may function as an antimicrobial peptide in the innate immune response. Paper_evidence: WBPaper00006488
          Curator_confirmed: WBPerson1843
          Date_last_updated: 04 Jan 2010 00:00:00
      Automated_description: Involved in defense response to fungus and innate immune response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R09B5.10
    Corresponding_transcript: R09B5.10.1
    Other_sequence: FD515309.1
      FD517195.1
      CSC00254_1
  Experimental_info: RNAi_result: WBRNAi00051593 Inferred_automatically: RNAi_primary
      WBRNAi00034768 Inferred_automatically: RNAi_primary
      WBRNAi00017625 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023635
      Expr1155266
    Drives_construct: WBCnstr00037452
    Construct_product: WBCnstr00037452
    Microarray_results (14)
    Expression_cluster (46)
    Interaction: WBInteraction000246414
      WBInteraction000395209
      WBInteraction000446983
      WBInteraction000503905
  Map_info: Map: V Position: -18.9284 Error: 0.001741
    Positive: Positive_clone: R09B5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00006437
    WBPaper00006488
    WBPaper00032891
    WBPaper00060703
    WBPaper00062289
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene